| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0246 |
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| Symbol | |
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| ID | 1219049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 271736 |
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| End bp | 275206 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637236603 |
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| Product | putative calcium binding hemolysin protein |
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| Protein accession | NP_518367 |
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| Protein GI | 17544965 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.383795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCAAT TCCAAAGTGC GTCCGCGTAT CAATTTACAA CTGCGTGTGA CAAAGGCGGC
GCTGGCAATG ACTACCTCAG CGGGGAAAAC GGCTCCGACA CCTATGTCTT CAATTCCGGC
TGGGGCCAGG ACACGATCTA CAACTACGAC ACCACCGCCG GTCGCTCCGA TGTCATCGAA
TTCGGCACGG GCATCGCAGC CAGCGACATC CTCGCCACTC GGAGTGGCGA CGACCTGATC
CTCTCCCTGC GCAACAGCTC CGACAAGGTC ACCGTCCAGT CCTACTTCAA CAGCGATGCC
ACCGGAGCCT ACCGCGTCGA CCTGATTCGC TTCGCGGACG GCACGACTTG GGATGTCAAG
ACAGTTAGCA CCAAGACAAT TGGCGCGACA AATGCCGCCG ATAATCTGTA TGGGTATGCG
ACGGATGACG AAATCAATGG CCTGGATGGC AACGACACCA TCCGCGGCTA CGGCGGCAAC
GACACTCTGC GCGGGGACGC CGGCGCCGAT ACCGTCTACG GTGGCGACGG CAACGACTCC
ATCGACGGCG GCGCCGACAA CGACTACCTC TACGGCGAGG CCGGTGACGA CCGCCTCCTG
GGCGGCTCGG GCAACGACAC CCTCTATGGC GGCAACGGCA ACGACACCCT CGAAGGCGGC
GCCGGCAACG ACTACCTCGT TGGCAACGAG GGCTCCGACA CCTACGTCTT CAACTCCGGC
TGGGGCCAGG ACACGATCTA CAACTACGAC ACCACCGCCG GGCGCTCCGA TGTCATCACC
TTCGGCACGG GCATCGCAGC CACCGACGTG ATTGCGACCC GCTCGGGCGA CGACCTCATC
CTCTCCCTGC GCAACGGCTC CGACAAGGTC ACCGTCCAGT CCTACTTCAA CAGCGACGCC
ACCGGTCCCT ATCGCATCGA CCAGGTCCGC TTCGCCGACG GCACCTCCTG GGACGTCGCT
GCCGTCAAAG CCCTCGTCCA GGCGCCCACC TCCGGCGCAG ACAACCTCTA CGGCTACGCC
TCCGACGACA CCCTGAACGG CCTCGACGGC AACGACACCC TCCGTGGTTA CGGTGGCAAC
GACACCCTGC GCTGGGACGC CGGCGCCGAC AACCTCTTCG GCGGTGACGG CAACGACGTA
CTCGACGGAG GCGCCGACAA CGACTACCTC TACGGCGAGG CCGGTGATGA TTCCCTGCAA
GGTGGTGCGG GCAACGACAA CCTGTACGGT GGCGCCGGCA ATGACACCCT AGAGGGTGGC
GCCGGCAACG ACTACCTCGT CAGCAATGAA GGCTCCGACA CCTACGTCTT CAACTCAGGT
TGGGGCCAGG ACACGATCTA CAATTACGAC ACCACCGCCG GTCGCTCAGA CGTCATCGCC
TTCGGTGACG GCATCGCGGC TAGCGACATC ATTGCTACCC GTTCGGGCGA CGACCTGATC
CTCTCCCTGC GCAACAGCTC CGACAAGATC ACCGTCCAGT CCTACTTCTA CAGCGACGCC
ACCGGTCCCT ATCGCATCGA CCAGGTCCAC TTCGCCGACG GCACCTCCTG GGACGTCGCC
GCCGTCAAGG CTCTCGTCCA GGTTCCCACC TCCGGCACCG ACAACCTCTA CGGCTACGCC
TCCGACGACG TCCTCAACGG CCTCGACGGC AACGACACCC TACGCGGCTA CGGCGGCAAC
GACACCCTCC GCGGTGACGC CGGTGCCGAT ACCGTCTACG GTGGTGACGG CAACGACTCC
ATCGACGGCG GCGCCGACAA CGACTACCTC TACGGCGAAG CCGGTGATGA CGCCCTTCAA
GGCAGCTCGG GCAACGACAC CCTCTACGGT GGCAACGGCA ACGACACCCT CGAAGGCGGT
GCCGGCAACG ACTACCTCGT CGGCAACGAG GGCTCCGACA CCTACGTCTT CAACACTGGT
TGGGGCCAGG ACACGATCTA CAACTACGAC GCCACCTCTG AGCGCTCCGA CGTCATCGAG
TTCGGTTCAG GCATCGCAGC CACCGATGTG ATTGCGACCC GCTCGGGCGA CGACCTCATC
CTCTCTCTGC GCAACGGCTC CGACAAGGTC ACCGTCCAGT CCTACTTCTA CAGCGACGCC
AGCGGTCCCT ACCGCATCGA CCAGGTCCGC TTCGCCGACG GCACTTCCTG GGACGTCGCC
GCCGTCAAGG CCCTCGTCCA GGTCCCCACC TCCGGCGCAG ACAACCTCTA CGGCTACGCC
TCCGATGACG TACTCAACGG CCTCGATGGC AACGACACCA TCCGCGGCTA CGGCGGCAAC
GACACCCTGC GCGGTGAGGC CGGCGCCGAC AACCTCTTCG GCGGTGACGG CAACGACGTG
CTCGATGGCG GCGCCGACAA CGACTACCTC TACGGCGAGT CCGGCGACGA CAGCCTCCTG
GGCGGCTCGG GCAACGACAA CCTGTACGGC GGCACTGGCA ACGACACCCT CGAGGGCGGC
GCCGGCAACG ACTACCTCGT CAGCAATGAA GGCTCCGACA CCTACGTCTT CAACTCAGGT
TGGGGCCAGG ACACGATCTA CAATTACGAC ACCACCGCCG GTCGCTCAGA CGTCATCGCC
TTCGGTGACG GCATCGCGGC TAGCGACATC ATTGCTACCC GTTCGGGCGA CGACCTGATC
CTCTCCCTGC GCAACAGCTC CGACAAGATC ACCGTCCAGT CCTACTTCTA CAGCGACGCC
ACCGGTCCCT ATCGCATCGA CCAGGTCCGC TTCGCCGACG GCACTTCCTG GGACGTCGCC
GCCGTCAAGG CCCTCGTCCA GGTCCCCACC TCCGGCGCAG ACAACCTCTA CGGCTACGCC
TCCGATGACG TACTCAACGG CCTCGATGGC AACGACACCA TCCGCGGCTA CGGCGGCAAC
GACACCCTGC GCGGTGAGGC CGGCGCCGAC AACCTCTTCG GCGGTGACGG CAACGACGTG
CTCGATGGCG GCGCCGACAA CGACTACCTC TACGGCGAAG CCGGCGACGA CAGCCTCCTG
GGCGGCTCGG GCAACGACAA CCTCTATGGC GGCAACGGCA ACGACACCCT CGAGGGCGGT
GCCGGCAACG ACTACCTCGT CGGCAATGAA GGCTCCGATA CCTACGTCTT CAACTCCGGC
TGGGGGCAGG ACTCCATCTA CAACTACGAC ACCTCCACCG GGCGCTCCGA TGTCATCGCC
TTCGGTGACG GCATCGCGAC AGACCAGCTC TGGTTCCGAC GAGTCAACGC CGATCTCGAA
GTGAGTGTGA TCGGCTCAAC CGACAAGACG ACCATCTCCA ACTGGTACTC CGGGGCTGCC
TATCACGTCG ACCAGTTCAC GACTGCCGAC GGAAAGCGCC TCCTCGATAC CCAAGTCGAT
AGCCTGGTCC AGGCCATGGC GTCCTTCAGC CCGCCAGCCT CGGGGCAGTC CACCTTGCCC
CAAAACTATC GGGATGCATT GGAAAGCGTC ATCACAGCCA ACTGGAAGTA A
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| Protein sequence | MYQFQSASAY QFTTACDKGG AGNDYLSGEN GSDTYVFNSG WGQDTIYNYD TTAGRSDVIE
FGTGIAASDI LATRSGDDLI LSLRNSSDKV TVQSYFNSDA TGAYRVDLIR FADGTTWDVK
TVSTKTIGAT NAADNLYGYA TDDEINGLDG NDTIRGYGGN DTLRGDAGAD TVYGGDGNDS
IDGGADNDYL YGEAGDDRLL GGSGNDTLYG GNGNDTLEGG AGNDYLVGNE GSDTYVFNSG
WGQDTIYNYD TTAGRSDVIT FGTGIAATDV IATRSGDDLI LSLRNGSDKV TVQSYFNSDA
TGPYRIDQVR FADGTSWDVA AVKALVQAPT SGADNLYGYA SDDTLNGLDG NDTLRGYGGN
DTLRWDAGAD NLFGGDGNDV LDGGADNDYL YGEAGDDSLQ GGAGNDNLYG GAGNDTLEGG
AGNDYLVSNE GSDTYVFNSG WGQDTIYNYD TTAGRSDVIA FGDGIAASDI IATRSGDDLI
LSLRNSSDKI TVQSYFYSDA TGPYRIDQVH FADGTSWDVA AVKALVQVPT SGTDNLYGYA
SDDVLNGLDG NDTLRGYGGN DTLRGDAGAD TVYGGDGNDS IDGGADNDYL YGEAGDDALQ
GSSGNDTLYG GNGNDTLEGG AGNDYLVGNE GSDTYVFNTG WGQDTIYNYD ATSERSDVIE
FGSGIAATDV IATRSGDDLI LSLRNGSDKV TVQSYFYSDA SGPYRIDQVR FADGTSWDVA
AVKALVQVPT SGADNLYGYA SDDVLNGLDG NDTIRGYGGN DTLRGEAGAD NLFGGDGNDV
LDGGADNDYL YGESGDDSLL GGSGNDNLYG GTGNDTLEGG AGNDYLVSNE GSDTYVFNSG
WGQDTIYNYD TTAGRSDVIA FGDGIAASDI IATRSGDDLI LSLRNSSDKI TVQSYFYSDA
TGPYRIDQVR FADGTSWDVA AVKALVQVPT SGADNLYGYA SDDVLNGLDG NDTIRGYGGN
DTLRGEAGAD NLFGGDGNDV LDGGADNDYL YGEAGDDSLL GGSGNDNLYG GNGNDTLEGG
AGNDYLVGNE GSDTYVFNSG WGQDSIYNYD TSTGRSDVIA FGDGIATDQL WFRRVNADLE
VSVIGSTDKT TISNWYSGAA YHVDQFTTAD GKRLLDTQVD SLVQAMASFS PPASGQSTLP
QNYRDALESV ITANWK
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