Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0213 |
Symbol | |
ID | 1219016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 235682 |
End bp | 236398 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236570 |
Product | glutamine amidotransferase |
Protein accession | NP_518334 |
Protein GI | 17544932 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.486178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTTA GACCACTGCT GCTGATTCAA GCGGGTACGC CACCCGATGC CATTCGCGCG CAAGTCGGAG ACCTGCCGCG ATGGTTCGGC GCGGCCATGG ATCGAGATTC GCAAGCATTT GAGATCGTCA GGGTCTTTGA AGGGGCGCCG CTTCCCGAAC CCGACGTGCA CCGGGCCGCG ATCATCACCG GCTCATGGTC GATGGTCACC GACCTGCACG CTTGGAGCGA AGCCACCGCC GACTGGATCC GGCGAGCCGT GGCGATCAAT ACACCTTTGT TTGGCGTTTG CTACGGGCAC CAGCTGATGG CGCACGCATT GGGCGGCAAG GTCGGCTATC ACCCGCGTGG TCGGGAGATG GGCTGCATGG ACATCGAGCG GCTGCCCTTG GCGCAGACGG AGCCCTTGCT TGCCGGCGCC CCGCAGCGAT TCAAGGCGCA TCTGACTCAC CTGCAGACCG TCGTGCAGTT GCCTGCCGGC GCAGAGGTTT TAGCCCGCTC GGCCCATGAT CCACATCAAG TCGTGCGTTA CAGTCCAACA GCGATTTCGA CGCAGTTCCA CCCAGAGTTC ACGCCGGCAA TTTCGTCGGC ATGTATCAGC ACACGCAGGC ATGTGCTGCG CGAGGAAGGA CTCGACCCCA CGGCAATGCT GAGCCAGCTG GACGACACGC CAACCCCCTT GCTGATGCTC AGGCGGTTTG TTGAGGCTTA CGCCTGA
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Protein sequence | MTVRPLLLIQ AGTPPDAIRA QVGDLPRWFG AAMDRDSQAF EIVRVFEGAP LPEPDVHRAA IITGSWSMVT DLHAWSEATA DWIRRAVAIN TPLFGVCYGH QLMAHALGGK VGYHPRGREM GCMDIERLPL AQTEPLLAGA PQRFKAHLTH LQTVVQLPAG AEVLARSAHD PHQVVRYSPT AISTQFHPEF TPAISSACIS TRRHVLREEG LDPTAMLSQL DDTPTPLLML RRFVEAYA
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