Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0208 |
Symbol | tISRso1 |
ID | 1219011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 231914 |
End bp | 232738 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236565 |
Product | ISRSO1-transposase protein |
Protein accession | NP_518329 |
Protein GI | 17544927 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAAAA AAGAACATCG AGAACGCGAG GCGAAGCTGG GTCGCAAGAC CAAGCGGTAC CCAAGCGACC TGACGGATAT CGAATGGGTC GCTGTGCAGC CGTTGCTGCC CCGCGCCGCC GTGCGAGGTC GGCGTCGGGA GTGCGACTTG AGGGAGGTGG TCAACGCCTT GCGCTATCTT GTGCGAGCGG GCTGCGGTTG GCGCATGCTG CCTCACGACT TCCCGCCTTG GCAAACCGTG TATTGGTGGT TTCGTCGGCT CATGCGTCGC TTCCTGTTCC GCACGCTGCA CGACGTGGTG CTGATGTTGG ACCGGGAGTT GGCTGGGCGG CAGCCGTGCC CAAGTGCGGG CGTCATCGAC AGCCAGACAG TCAAAGCGCC CTCGGCCGAC AAGCGTGGCT ACGACGCGGC CAAGAAAATC GTCGGGCGCA AGCGGCATAT CGCGGTGGAC ACGGATGGAC GGCTGCTGAT GGTGAACCTG ACACCGGCGG ACATTGCTGA TAGCACGGGT GCGCTGGCGG TGCTGGAAGC GGTGAAGAAG CGCTGGCCAG GCATAAAACA CCTGTTCGCT GACGGTGCGT ATGACCGCAC AGCGCTGATG GACAAGGCAT CGACCCTCGA CTTCGTGGTT GAGGTGGTGC GCCGGCACGA GCAGCAAACG GGCTTTGCCG TTCTGCCGCG CCGCTGGGTG GTCGAGCGCA CCTTTGGATG GATGGTTCGC TGGCGTCGAC TCGTACGCGA CTACGAACAG CGGGCAGACG TATCGGAAGC CATGATTCAT ATCGCGATGA GCGGCTTGCT ACTGCGCAGA ATCGCTCATC CTTGA
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Protein sequence | MWKKEHRERE AKLGRKTKRY PSDLTDIEWV AVQPLLPRAA VRGRRRECDL REVVNALRYL VRAGCGWRML PHDFPPWQTV YWWFRRLMRR FLFRTLHDVV LMLDRELAGR QPCPSAGVID SQTVKAPSAD KRGYDAAKKI VGRKRHIAVD TDGRLLMVNL TPADIADSTG ALAVLEAVKK RWPGIKHLFA DGAYDRTALM DKASTLDFVV EVVRRHEQQT GFAVLPRRWV VERTFGWMVR WRRLVRDYEQ RADVSEAMIH IAMSGLLLRR IAHP
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