| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0204 |
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| Symbol | deoA |
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| ID | 1219007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 225922 |
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| End bp | 227445 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637236561 |
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| Product | thymidine phosphorylase |
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| Protein accession | NP_518325 |
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| Protein GI | 17544923 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.61192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTC CGCCTGAGGT GGCAGCACTG CCCGATCGGC TTACCTTCAA GCCGTTGGGC
ATCGACACTT GGCAGGAGCA CGTCATCTAC ATGCATCCGG ATTGCGCAAT CTGCCGGGCT
GAGGGGTTCA CTGCACAAGC TCGGGTGGAG GTGCGGATCG GTCTGCGCTC CTTGATTGCC
ACACTCAATC TCGTCGGCTC AGGCTTGCTG GAGATGTGTG AGGTCAGCTT GTCCGTCAGC
GCCGTCGAGA CGCTGATGGC GAGGCCCGGC GATATTGTGA CTGTCAGTCA CGCGCCCGCG
CTGGAGTCGC TGCGGGCGGT ACGCGCCAAG ATCTATGGGG CGCATCTGGA TACGCATCAA
CTGGCTAGCG TCGTCGGTGA TATTGCCAAA GAGCGGTATG CCGACGTCCA CATTGCGGCG
TTCCTGAGCG CCTGCGCAGG CGGGCGAATG AGCGTCAAGG AGACAATCGA TCTCACCCAG
GCCATGGTCG ACTCGGGCGA ATGTCTCGAA TGGGATCGCG AGATCGTCGC GGACAAGCAC
TGTGTGGGCG GCTTGCCGGG CAACCGTACC AGTCCCATCG TGGTCGCCAT CGCTGCCGCT
GCAGGCTTGT TGCTACCTAA GACCTCGTCG CGCGCCATCA CGTCACCCGC CGGTACCGCC
GACACGATGG AGACACTCAC GCGTGTTGCT CTGAGCGCCA CGGAGTTGCG ACGCGTCGTT
GATCGGGTTG GAGCTTCGCT CGCGTGGGGC GGTGCGCTCA GCCTTAGCCC CGCCGACGAC
GTGCTCATTC GCGTGGAGCG GGCGTTGGAT GTGGATAGCG ATGCCCAACT TGCGGCCTCC
ATTCTGTCGA AGAAGATCGC GGCCGGGTCA ACCCATGTCT TGATCGACGT GCCCGTGGGG
CCGACGGCCA AGGTGCGCAG TCTGCAGGAT TTGGAGCGCC TGCGTATGCT GCTCGAGCGC
GTAGCGCGGT CGTTCGGCGT GCGCGTCACG ATCGTGCGCA CGGACGGCTC GCAGCCGGTT
GGCAGGGGAA TTGGTCCGGC GCTTGAAGCA CGAGACGTCT TGGCCGTGCT TCAACGCTCT
CCTGCGGCGC CGTTCGACCT GCGGGAGCGG TCGTTGTTGC TGGCTGCGAC TCTGCTAGAG
TTTTGTGGGG CGGTGGAGCA GGGGGCAGGG CTTGAGATGG CCACAGGCGT GCTGGACAGT
GGTGCGGCGT GGCGGAAGTT CGAGGAAATC TGCGAAGCGC AGGGAGGCCT GCGTGTGCCA
GGTGAGGCCA TCTTCCGTCG TGATGTGGTA GCTGAGCAAG ACGGCATCGT CACCGAGATC
GACAACCGAC ATCTTGCTCG TATCGCGAAA CTCGCGGGGG CTCCGATGCG CCAAGTGGCA
GGCGTGGAGA TGCACGTGAG ACTACACGAC CAGGTTAAGG CGGGGCGGCC TCTCTTTACC
ATCCATGCCC AGGCTTCAGG TGAACTGGAA TATTCCGTAG CTTATGCACT GATGCACCCA
GCGGTTTCCA TCGCCCCGAC TTGA
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| Protein sequence | MLAPPEVAAL PDRLTFKPLG IDTWQEHVIY MHPDCAICRA EGFTAQARVE VRIGLRSLIA
TLNLVGSGLL EMCEVSLSVS AVETLMARPG DIVTVSHAPA LESLRAVRAK IYGAHLDTHQ
LASVVGDIAK ERYADVHIAA FLSACAGGRM SVKETIDLTQ AMVDSGECLE WDREIVADKH
CVGGLPGNRT SPIVVAIAAA AGLLLPKTSS RAITSPAGTA DTMETLTRVA LSATELRRVV
DRVGASLAWG GALSLSPADD VLIRVERALD VDSDAQLAAS ILSKKIAAGS THVLIDVPVG
PTAKVRSLQD LERLRMLLER VARSFGVRVT IVRTDGSQPV GRGIGPALEA RDVLAVLQRS
PAAPFDLRER SLLLAATLLE FCGAVEQGAG LEMATGVLDS GAAWRKFEEI CEAQGGLRVP
GEAIFRRDVV AEQDGIVTEI DNRHLARIAK LAGAPMRQVA GVEMHVRLHD QVKAGRPLFT
IHAQASGELE YSVAYALMHP AVSIAPT
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