Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0187 |
Symbol | |
ID | 1218990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 209518 |
End bp | 210048 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637236544 |
Product | hypothetical protein |
Protein accession | NP_518308 |
Protein GI | 17544906 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0330126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGA ACTTGATCGT GTACTACTCC CGCACCGGTA CTGCGCGGCA GGTAGCAGAG CAGATGGCAG CACAAAGCGG CTGGCAGCTC GCCGAAGTCT CGGATGAATA CCCACGAGCC GGTTTTTTCG GTGATCTGCG CTGCGTAGTC GAGACGGTTT TCCACAAGCG CGCCAAGTAT CGCTACGCAG GACCGCCGCT AACGGAGGTC GACCAGGTCA TCGTGATGGC GCCTATCTGG ATGGGCCACT TGGCGTCGCC CATGCGGGAC TTCTTGGCTG ACCAGTCGCC GTTCTCGGCG AATCTGTCAG TGATCTGTGT CATGGCTTCG CGCGGGGCAT TTGCCGCCGT CGAGGAGATC GCACGTATCA CCGCTAGCCT TCCGGCCCCC GTCCTGGCGC TTTGCCAGCG TGACGTGCTC AGCGGCCTTT CGCAGCAAGA GATCGCAGGC TTCATCGACC AGGTGAAGAC TGCTGGCAAG TGGGAGCAGT CCAAGCGGCG GCCGGCGTGG CTCTCGCCCA CCGAAGCCTG A
|
Protein sequence | MEKNLIVYYS RTGTARQVAE QMAAQSGWQL AEVSDEYPRA GFFGDLRCVV ETVFHKRAKY RYAGPPLTEV DQVIVMAPIW MGHLASPMRD FLADQSPFSA NLSVICVMAS RGAFAAVEEI ARITASLPAP VLALCQRDVL SGLSQQEIAG FIDQVKTAGK WEQSKRRPAW LSPTEA
|
| |