Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0179 |
Symbol | |
ID | 1218982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 203511 |
End bp | 203966 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637236536 |
Product | hypothetical protein |
Protein accession | NP_518300 |
Protein GI | 17544898 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.096278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAC GCATCCTGCT CGCCATCGAC GGCAGCCACG CGTCCTATCT CGCCCTGCAC CAGGCGATTG TGGTCAGCAA AGCGACGGGC GCCGAAATCG AAGCCCTCTT TGTTGCCGAT AGCAGCGACG TGACCTTCGA CATGGTCGGG GCTGACTCCG TTGCCTACGC CAAACAGGTT GTCGAGTTCG GCCGAGACAC GCTGGCCGAG GTTGCGACCA AATTGGAGGC CGCTGGCGTC AAGCATTCGA CCAAGTTGCT AGAGAAATCC ATTGTGCCGG GGCAGATTTC CGCAACGATT GTGGCCGAGG CCAACGAGAC CGGCACTGAC CTGATTGTGC TTGGTACTCA CGGCCGGCGC GGGCTCAAAC ACCTGGTGCT TGGCAGTGTG GCCGAAGGCG TAGTGCGCAA GACGAACAAA CCTGTGCTGA TGGTTCGCAG CGAGGTTGAG GAGTGA
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Protein sequence | MYQRILLAID GSHASYLALH QAIVVSKATG AEIEALFVAD SSDVTFDMVG ADSVAYAKQV VEFGRDTLAE VATKLEAAGV KHSTKLLEKS IVPGQISATI VAEANETGTD LIVLGTHGRR GLKHLVLGSV AEGVVRKTNK PVLMVRSEVE E
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