| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0178 |
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| Symbol | glmS |
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| ID | 1218981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 200835 |
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| End bp | 202673 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236535 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | NP_518299 |
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| Protein GI | 17544897 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.149941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCA TCGTCGGCGC GGTTTCCACG CGCAATATCG TTCCCGTCCT GATCGAAGGC
CTGCGCCGCC TGGAGTACCG CGGCTATGAC TCCTGCGGCG TGGCCGTGCA GCGCGACGGC
CAGCTGGAGC GCGCCCGCAC CGTCTCGCGC GTGGCCGACC TGGACACGCA GGCGCAGTCG
AGCCACCTGG ACGGCGCCAT CGGCATCGCC CACACCCGCT GGGCCACGCA CGGCCGGCCG
GACACCGTCA ACGCCCACCC GCACTTCTCG GGCGACACCA TCGCCCTGGT GCACAACGGC
ATCATCGAGA ACTACGAAAC GCTGCGCGAA GAGCTGAAGG CCGTCGGCTA CGGCTTCGAA
TCGCAGACCG ATACCGAGGT GGTCGCCCAC CTGATCCACC AGGCCTACAC CTACCCGAGC
AGCGCCACGC GCGGCCACCT GTTCGCCTCG GTGCGCGCGG TGGTCAAGCG CCTGCACGGC
GCCTACGCGA TCGCCGTGTT CGCGCGCGAC AACCCCGACG TGGTGGTGGG CGCGCGCGCC
GGCTCGCCGC TGGTGGTGGC GCTGGGCGAC AACGAATCGT TCCTGGCCTC CGACGCACTG
GCCGTGGCCG GCACCGCCAA CCGCATCGTC TACCTGGAAG AGGGCGATGT GGTCGAGCTC
ACCCGCGAGG GCCTCACCGT GGCCGACGCG CGCGACCACG TGGTCGAGCG CGAGGTCAAG
GTGGTCGAGG CGCACGCCGC CGCCGTGGAG CTGGGTCCGT ACCGCCACTT CATGCAGAAG
GAAATCTTCG AGCAGCCGCG CGCGCTGGGC GACACGCTGG AAGGCGTGCA GGGCTTCGCG
CCCGACCTGT TCGGGCCGCG CGCCGCCGAG GTGCTGCCCA AGGTCGACAG CGTGCTGATC
CTGGCCTGCG GCACCAGCTA CTACTCGGGC TGCACCGCCA AGTACTGGCT CGAATCGATC
GCCAAGATCC CCACCCAGGT GGAAGTGGCC AGCGAATACC GCTACCGCGA CACGGTGCCC
AACCCCAACG CGCTCGTCGT CGTGATCTCG CAATCGGGTG AAACCGCCGA CACGCTGGCC
GCGCTGCGCC ACGCGCGCGA GCTGGGCCAC ACGCACACGC TGGCCATCTG CAACGTGGCG
ACCAGCGCCA TGGTGCGCGA GACCGAGCTC AGGTTCCTCA CGCGCGCCGG CACCGAGATC
GGCGTGGCGT CCACCAAGGC CTTCACCACG CAGCTCGCCG CGCTGTACAT GCTGGCGCTG
ACGTTCGCCA AGCTGCGCGG CCACTTGAAG GCCGAGGCCG AGGAAGTCGC GTTGCGCCAG
CTGCGCCACC TGCCGTCGGC GCTCAACGCG GTGCTGGCGC TCGAGCCGCA GATCATCGCG
TGGTCGGAAG AATTCACCCG CCGCGAGAAC GCGCTGTTCC TCGGCCGCGG CCTGCACTTC
CCGATCGCCA TGGAAGGCGC GCTCAAGCTC AAGGAGATCT CCTACATCCA CGCCGAGGCG
TACCCCGCCG GCGAACTCAA GCACGGCCCG CTCGCGCTGG TGACCGAGCA GATGCCGGTG
GTGACGGTCG CGCCCAACGA CGCGCTGCTG GAGAAGCTCA AGTCCAACAT CCAGGAAGTG
CGCGCGCGCG GCGGCAAGCT CTACGTGTTC GCCGATGCCG ACACGCATAT CCAGTCGAGC
GACGGCATCC AGGTGATCCG CATGCCCGAG CACTATGGGC AGCTGTCGCC GATCCTGCAC
GTGGTGCCGC TGCAGCTGCT GGCGTATCAC ACCGCCGTGG CGCGCGGGAC GGATGTGGAT
AAGCCGCGGA ATTTGGCTAA GTCTGTGACG GTGGAGTGA
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| Protein sequence | MCGIVGAVST RNIVPVLIEG LRRLEYRGYD SCGVAVQRDG QLERARTVSR VADLDTQAQS
SHLDGAIGIA HTRWATHGRP DTVNAHPHFS GDTIALVHNG IIENYETLRE ELKAVGYGFE
SQTDTEVVAH LIHQAYTYPS SATRGHLFAS VRAVVKRLHG AYAIAVFARD NPDVVVGARA
GSPLVVALGD NESFLASDAL AVAGTANRIV YLEEGDVVEL TREGLTVADA RDHVVEREVK
VVEAHAAAVE LGPYRHFMQK EIFEQPRALG DTLEGVQGFA PDLFGPRAAE VLPKVDSVLI
LACGTSYYSG CTAKYWLESI AKIPTQVEVA SEYRYRDTVP NPNALVVVIS QSGETADTLA
ALRHARELGH THTLAICNVA TSAMVRETEL RFLTRAGTEI GVASTKAFTT QLAALYMLAL
TFAKLRGHLK AEAEEVALRQ LRHLPSALNA VLALEPQIIA WSEEFTRREN ALFLGRGLHF
PIAMEGALKL KEISYIHAEA YPAGELKHGP LALVTEQMPV VTVAPNDALL EKLKSNIQEV
RARGGKLYVF ADADTHIQSS DGIQVIRMPE HYGQLSPILH VVPLQLLAYH TAVARGTDVD
KPRNLAKSVT VE
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