| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0169 |
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| Symbol | |
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| ID | 1218972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 189657 |
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| End bp | 190595 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637236526 |
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| Product | putative transmembrane oxidoreductase protein |
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| Protein accession | NP_518290 |
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| Protein GI | 17544888 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.410172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.889445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAA CCCGCATTGT CCTCCCAGGC GGCGCCGGCC TCGTCGGCCA GAACCTCGTG
GCACGGCTCA AAGCACGCGG CTATACCAAC CTCGTCGTGC TCGACAAGCA CGAGGCCAAC
CTCGATGTGC TGCGCTCGGT CCACCCGGAT ATCACCGCCG TCTTCGCCGA CCTGGCGGAA
CCGGGCGACT GGGCAAGGCA TTTCGAAGGC GCCGATGTGG TCGTGATGCT GCAGGCCCAG
ATCGGTGCGC CGACGCGCGA GCCTTTCGTC CGCAACAATA TCGACTCGAC GCGCTGCGTG
CTCGAGGTAA TCAAGCAGCA TGCCATTCCA TACACCGTCC ATATCAGCTC GTCCGTCGTC
AAATCGGTCG GCGAGGACTG GTACACCGAG ACCAAGCGCG AGCAGGAAGC GATCGTGCTC
GCCTCGGGCA TCGGATGTGT CGTGCTGCGG CCGACGCTCA TGTTCGGCTG GTTCGACCGC
AAGCATCTCG GCTGGCTGTC GCGCTTCATG CAGCGCGTGC CGGTGTTTCC GATTCCGGGC
AGCGGGCGCT ACATGCGCCA GCCGCTTTAC GTCGGCGACT TCTGCAACGT GATCATCAGC
TGCATCGATT CGCGGATCCA GGGGCAGACC TTCGACATCA CCGGGCTGGA GCGCATCGAC
TACATCGATA TCATCCGCCA GATCAAGCGC GTGACCCGCG CACGCTGCGC GATCGTGCGC
ATTCCCTACG GCCTGTTCCA TATCCTGCTG AAGGTCTATG CCCTCTTCAG CAAGAACCCG
CCATTCACGG CGGACCAGCT CAAGGCTCTG ACGGCCGGCG ACGAGTTCGA CGTGATCGAT
TGGGAACGCA TCTTCGCCAT CCGCGCGACA CCGTTTGCCC AGGCGATGGA GGAGACGTTC
AACGATCCGA CCTACAGTCA CATCGCGCTT GAATTCTGA
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| Protein sequence | MNPTRIVLPG GAGLVGQNLV ARLKARGYTN LVVLDKHEAN LDVLRSVHPD ITAVFADLAE
PGDWARHFEG ADVVVMLQAQ IGAPTREPFV RNNIDSTRCV LEVIKQHAIP YTVHISSSVV
KSVGEDWYTE TKREQEAIVL ASGIGCVVLR PTLMFGWFDR KHLGWLSRFM QRVPVFPIPG
SGRYMRQPLY VGDFCNVIIS CIDSRIQGQT FDITGLERID YIDIIRQIKR VTRARCAIVR
IPYGLFHILL KVYALFSKNP PFTADQLKAL TAGDEFDVID WERIFAIRAT PFAQAMEETF
NDPTYSHIAL EF
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