| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0163 |
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| Symbol | |
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| ID | 1218966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 183367 |
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| End bp | 184302 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236520 |
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| Product | lipoprotein |
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| Protein accession | NP_518284 |
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| Protein GI | 17544882 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0904469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.961053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCGG TGGCGATGGC AGCGGCGGTG ACCGGTTGCG GCAACCCGGA CACCCAGTCC
TACCAGGGCT ACGTGGAAGG CGAGTTCGTC TATGTCGCCT CGCCGGTGGG CGGGCGGCTG
GAGCACCTGG GTGTGCAGCG CGGCCAGACG GTGAGCGCCG GCACGCCGTT GTTCATACTG
GAATCCACCG ATGAAGCGGC CGCGCGCCAG CAGGCCGCTG CCCAGCAGCA GGCCGCCGAG
GCACAGCTGG CCGACCTGAA CCTCGGTCGC CGGGTCCCGG AGGTCGATGC GGTGCGTGCG
CAGCTGGCGC AGGCGGTGGC GGCCGACCAG CTCTCGGCCA CGCAGCGGGT GCGAGACGAG
GCCCAGTTCC GCGCCGGCGG CATCCCGCAA GCGCAGCTCG ATGCCAGCCG TTCGACCGCG
CAGACCAACG CCCAGCGCGT GCGCGAGCTG ACCAACCAGC TGCGCATCGC CCAGCTGCCG
GCGCGCACCG ACCAGATCCA TGCGCAGTCG GCGCAGGTCG AGGCGGCGCG CGCCGCCGTC
GCGCAGGCCC AGTGGCGGCT CGACCAGAAG GCGCAGAAGG CCACGCAGGG CGGCCTGGTG
TTCGACACGC TGTATCGCGA AGGCGAATGG GTCGGAGCCG GCAGCCCCGT GGTGCGCATG
CTGCCGCCGG CCAACGTGAA GGTGCGCTTC TTCGTGCCGG AAGGCGTGGT GGGGCGCCTC
AAGCCGGGGC AGGCCGTGCG CATCCGCTGC GACGGCTGCG CCGCCGAGGT GAACGCCACC
ATCAGCTACG TCGCCAGCGA GGCCGAGTAC ACCCCGCCCG TGATCTACAG CAACAGCCGG
CGCGACAAGC TCGTCTTCAT GGTGGAGGCG CGGCCGGCCG CCGCGGATGG CCCCAAACTG
CGCCCAGGCC AGCCCGTCGA GGTGGCGCTG CCATGA
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| Protein sequence | MAAVAMAAAV TGCGNPDTQS YQGYVEGEFV YVASPVGGRL EHLGVQRGQT VSAGTPLFIL
ESTDEAAARQ QAAAQQQAAE AQLADLNLGR RVPEVDAVRA QLAQAVAADQ LSATQRVRDE
AQFRAGGIPQ AQLDASRSTA QTNAQRVREL TNQLRIAQLP ARTDQIHAQS AQVEAARAAV
AQAQWRLDQK AQKATQGGLV FDTLYREGEW VGAGSPVVRM LPPANVKVRF FVPEGVVGRL
KPGQAVRIRC DGCAAEVNAT ISYVASEAEY TPPVIYSNSR RDKLVFMVEA RPAAADGPKL
RPGQPVEVAL P
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