| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0161 |
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| Symbol | |
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| ID | 1218964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 180943 |
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| End bp | 182454 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236518 |
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| Product | transmembrane aldehyde dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518282 |
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| Protein GI | 17544880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.221035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.540885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCT CGCCAGAAAC CCTGCTGCAG CGCCTGCATC TCGACACCCT GACCGGCGGC
GACGGACCAC TCGCCGCGCG TTCGCCCATC GACGGCGCGG TGCTCGCCCG CCTGCCGGTC
GAAACAGCCG CCGACGCCGA CCGCATCGTT GCCCAGGCAC ATGCCGCGTT CCGGAACTGG
CGTACCGTGC CCGCGCCGCG CCGGGGCGAA CTGGTCCGGC TGCTCGGCGA GGAGTTGCGC
GCGCACAAGG CGGACCTCGG CGCGCTGGTC ACGCTGGAGG CCGGCAAGAT CACGCAAGAG
GGCCTGGGCG AAGTGCAGGA GATGATCGAC ATCTGCGACT TCGCCGTCGG TCTGTCGCGG
CAGCTGTATG GGCTCACCAT CGCCAGCGAG CGGCCCGCGC ATCGCATGAT GGAAACGTGG
CATCCGCTGG GGCCGTGCCT GGTCATCACC GCGTTCAACT TCCCGGTGGC CGTGTGGGCG
TGGAACGCGA CCTTGGCGCT GGTCTGCGGC GACCCCGTCA TCTGGAAGCC CTCGGAGAAG
ACGCCGCTGA CGGCGCTGGC GGTCGAGCGC CTGTTCCTGC GCGCCTGCCA GCGCTTCGGC
GAGGCGCCGC CGCACCTGGC GCAGGTGGCC ATCGGCGCAC ACGATCTGGG CGAGGCGCTG
GCGCGCCACC CGGGCGTTCC GCTGGTGTCG GCCACCGGCA GCACGGGGAT GGGCCGCGCG
GTCGCCCAGG CCGCGGCGCC CCGCTTTGCG CGCACCATCC TCGAGCTGGG CGGCAACAAC
GCCGCCATCG TCTGCACCAG CGCGGACCTG GCGCTGGCCG AGCGCGCCAT CGCCTTCGCG
GCGATGGGCA CGGCCGGGCA ACGCTGCACG TCGCTGCGCC GCCTGTTCGT GCAGCGGCCG
GTCTACGACG CGCTGGTGCC GCGGCTGACG ACGCTGTATG CGCGCGTGCA GGTTGGCGAT
CCGCGCGATG ACGGCACCCT GGTCGGCCCG CTGATCGACG GCCATGCCTA CGAGCGGATG
CAGGCCGCGC TGGCCCGCGC ACGCGCGGAA GGCGGCACCG TGCACGGCGG CGGGCGCGTC
ACGGTCGGCG CCGGCGATGG CGCCTACTAC GTGCGCCCTG CCCTGGTGGA GATGCCCGCG
CAGGACGGCG TGGTCTGCGA GGAAACCTTC GCGCCCATCC TCTATGTGAT GCCGTTCGAC
TCGCTGGACG AAGCCATCGC CCTGAACAAC GCCGTGCCGC ATGGCCTGTC GTCGAGCCTG
TTCACGCTGG ACATGCGCGA GGCGGAGCGC TTCGTCTCGG CCACCGGCAG CGACTGCGGC
ATCGCCAACG TCAACATCGG CCCGAGCGGC GCGGAGATCG GCGGCGCGTT CGGCGGCGAG
AAGGACACCG GCGGCGGCCG CGAAGCCGGC TCGGATGCCT GGAAGGCCTA CATGCGCCGC
GCCACCAATA CCGTCAACTA CGGCACGGCG CTGCCGCTGG CGCAGGGTAT CCGGTTCGAG
GTGGGGGGCT AG
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| Protein sequence | MSPSPETLLQ RLHLDTLTGG DGPLAARSPI DGAVLARLPV ETAADADRIV AQAHAAFRNW
RTVPAPRRGE LVRLLGEELR AHKADLGALV TLEAGKITQE GLGEVQEMID ICDFAVGLSR
QLYGLTIASE RPAHRMMETW HPLGPCLVIT AFNFPVAVWA WNATLALVCG DPVIWKPSEK
TPLTALAVER LFLRACQRFG EAPPHLAQVA IGAHDLGEAL ARHPGVPLVS ATGSTGMGRA
VAQAAAPRFA RTILELGGNN AAIVCTSADL ALAERAIAFA AMGTAGQRCT SLRRLFVQRP
VYDALVPRLT TLYARVQVGD PRDDGTLVGP LIDGHAYERM QAALARARAE GGTVHGGGRV
TVGAGDGAYY VRPALVEMPA QDGVVCEETF APILYVMPFD SLDEAIALNN AVPHGLSSSL
FTLDMREAER FVSATGSDCG IANVNIGPSG AEIGGAFGGE KDTGGGREAG SDAWKAYMRR
ATNTVNYGTA LPLAQGIRFE VGG
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