Gene RSc0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0159 
Symbol 
ID1218962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp178653 
End bp179879 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID637236516 
Productacetylornithine aminotransferase protein 
Protein accessionNP_518280 
Protein GI17544878 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR01885] ornithine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.903246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG CAGCCACTCA CCCCAGCTAT GCCCTGGAAA CACGCTACGG CGCGCGCAAC 
TACGCGCCGC TGCCGGTGAT GCTGGAACGC GGCGAAGGCG TCTGGCTGTT CGACACGGCG
GGCCGGCGCT ACCTCGACAT GATGTCGGCC TACTCCGCCG TCAGCTTCGG CCATTCGCAC
CCGCGGCTGG TCGCCGCGCT GGTCGAACAG GCCGGCCGGC TGACGCTGAC TTCGCGCGCC
TTCCACAACA CCGAGCTCGG GCCGTTCCTG GCCGACGTGT GCCGCATCAC GCGCATGGAC
CGCGCGCTGC CGATGAACAC CGGCGCCGAG GCCGTGGAGA CCGCCATCAA GGCGGCCCGC
AAATGGGCCC GCGAGGTCAA GGGCACCCCG CCGGACGCCG CCGAGATCAT CGTCTTCGAC
AACAACTTCC ACGGCCGCAC CACCACCATC GTCGGCTTCT CGTCGCACGA GCAGTACCGC
TACGGCTTCG GCCCGTTCGC GGCGGGTTTC CGCCGCATCC CGTTCGGCGA TGCCGAGGCG
CTGAAGGCCG CCATCGGCCC CCATACCGGC GCCATCCTGA TCGAGCCGAT CCAGGGCGAG
GGCGGCATCG TGGTGCCGCC GCCCGGCTAC CTGAAGCTCG CGCGCGACCT GGCGACGCAG
CACAACGCCC TGCTCGTCTG CGATGAGGTG CAGACCGGGC TGGGCCGCAC GGGCGACGTG
CTCGCCAGCT GGCACGAGGA CGTGCAGCCC GACCTGGTGG TGCTGGGCAA GGCGCTCGGC
GGCGGCATGG TGCCGGTGTC GGCCATCGCG GGGCGGGAAG ACGTGATCGG CGTATTCCAG
CCGGGCGACC ACGGCTCCAC CTTCGGCGGC AACCCGCTGG CCGCGCACAT CGGCCGCGCG
GCACTGGCCT TGCTGCAGGA AGCGCAGTTG CCGCGGCACG CGGCCCGCCT GGGCGAAGCC
TTCATCGCCG AACTGCAATC GCTGATCGGG CACGGCGTGC GGCAGGTGCG CGGGCGCGGC
CTGATGATCG GCCTGCAGCT CGACGCCGAC ATCGATGCGC ACGATTTCGC GGCCGCGCTG
GCCGGGCACG GCGTACTGAC CAAGGACACC TACGGCAACG TGGTCCGCCT GACCCCGCCG
CTGGTGATCG CGCAGCAGGA GCTGGAGCTG GCGCGGGACG TCATCCGCCG CACGCTGGCC
GACTGGCCGC GCCGCAAGGC GGCCTGA
 
Protein sequence
MTTAATHPSY ALETRYGARN YAPLPVMLER GEGVWLFDTA GRRYLDMMSA YSAVSFGHSH 
PRLVAALVEQ AGRLTLTSRA FHNTELGPFL ADVCRITRMD RALPMNTGAE AVETAIKAAR
KWAREVKGTP PDAAEIIVFD NNFHGRTTTI VGFSSHEQYR YGFGPFAAGF RRIPFGDAEA
LKAAIGPHTG AILIEPIQGE GGIVVPPPGY LKLARDLATQ HNALLVCDEV QTGLGRTGDV
LASWHEDVQP DLVVLGKALG GGMVPVSAIA GREDVIGVFQ PGDHGSTFGG NPLAAHIGRA
ALALLQEAQL PRHAARLGEA FIAELQSLIG HGVRQVRGRG LMIGLQLDAD IDAHDFAAAL
AGHGVLTKDT YGNVVRLTPP LVIAQQELEL ARDVIRRTLA DWPRRKAA