Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0157 |
Symbol | |
ID | 1218960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 177277 |
End bp | 177669 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236514 |
Product | hypothetical protein |
Protein accession | NP_518278 |
Protein GI | 17544876 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1539] Dihydroneopterin aldolase |
TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase [TIGR00526] FolB domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTCC TGCTTTCCCA TCCGCGCCTG GCGCACTGCC GCCGCCTGTT CCTGCGCAAC TACGAGGTGC AGATCAACAT CGGCGTGCAC GAATTCGAGA AGAAGGGCGA GCAGCGCGTC CTCGTCAATA TCGATCTGTA CGTGCCGCTG GCGTACTCCA CGCCCCAGCA CGACAAGCTG CACGAGGTGG TCGACTACGA CCTCATGCGC GAGACCGTGG CGCGCCGCAT GGCGCAAGGC CACGTGCACC TGCAGGAAAC CCTGTGCGAC GACGTGCTGG CGGGCCTGCT CGCGCATCCG CATGTGCTGG CCGCGCGGGT CTCGGCGGAG AAGCCGGACG CTTATCCGGA TTGCGAGTCG GTGGGCGTGG AAGTGTTCCG CATCAAGGAC TGA
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Protein sequence | MPFLLSHPRL AHCRRLFLRN YEVQINIGVH EFEKKGEQRV LVNIDLYVPL AYSTPQHDKL HEVVDYDLMR ETVARRMAQG HVHLQETLCD DVLAGLLAHP HVLAARVSAE KPDAYPDCES VGVEVFRIKD
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