| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0156 |
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| Symbol | |
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| ID | 1218959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 176457 |
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| End bp | 177260 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236513 |
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| Product | short chain dehydrogenase |
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| Protein accession | NP_518277 |
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| Protein GI | 17544875 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGA CGCCGAACGA ATCGCCCATA TTGCCCCGCA TTGCCCTCGT GACCGGCGCC
GCCCGCCGCG TAGGCCGCGT GATCGCGCTG GCGCTGGCCC GGCAGGGCTG GGATGTCGCC
GTGCATTGCC ACCGCTCCCG CGCAGAGGCC GACGCGGTCG CCGCCGAGAT CATCGCCATG
GGCCGGCGCG CCGCCGTGCT GCAAGCGGAT CTGGCCGACG AGGCGGCCGC AGGCCGGCTC
ATTGCCGACT GCACCGCAGC GCTGGGTACG CCCACGTGCC TGGTCAACAA TGCCTCCCTG
TTCCAGTACG ACGTGGCGAC CAGCTTCAGC TACGCCTCGC TCGACACGCA CATGCGCATC
AACGTGGCGG CGCCGCTGCT GCTCGCGCGC GAGCTGCACC GGGTGCTGGC GGCCGAGGAC
GGCGGCGCGG GCGAGGTGCG CGGCGTGGTC GTCAACCTGC TCGACCAGAA GCTGGACAAC
CTGAACCCGG ACTTCCTGTC GTACACGCTG TCCAAGGCGG CGCTGGCGAC CGCGACGACG
CAATTGGCCC AGGCGCTCGC GCCCACGCTG CGCGTGGTGG GCGTGGCGCC CGGGGCGACA
CTGGTGTCCT GGAAGCAGTC GGAGAGCGGG TTCGAGCGCG CACACAAGAT GGCGCCGCTG
GGGCGCTCGT CCACGCCGGA AGACATTGCC GAGGCGGTGT GCTATCTGAC CACCGCGCGG
GCCGTCACCG GCACCACGCT GTTCGTCGAC GGCGGCCAGC ACCTGATGCC GCTGGCCCGC
GACGTGATGT TCCTGACCGA ATAA
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| Protein sequence | MAQTPNESPI LPRIALVTGA ARRVGRVIAL ALARQGWDVA VHCHRSRAEA DAVAAEIIAM
GRRAAVLQAD LADEAAAGRL IADCTAALGT PTCLVNNASL FQYDVATSFS YASLDTHMRI
NVAAPLLLAR ELHRVLAAED GGAGEVRGVV VNLLDQKLDN LNPDFLSYTL SKAALATATT
QLAQALAPTL RVVGVAPGAT LVSWKQSESG FERAHKMAPL GRSSTPEDIA EAVCYLTTAR
AVTGTTLFVD GGQHLMPLAR DVMFLTE
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