Gene RSc0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0153 
Symbol 
ID1218956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp172934 
End bp173878 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content71% 
IMG OID637236510 
Productputative signal peptide protein 
Protein accessionNP_518274 
Protein GI17544872 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.700817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.82157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCC TCGCGCGCTC CCTGCCCCTC CTGCTCGGAC TCGGCCTGGC CGCCTGGGCC 
GGCGCCACGG ACGGCCCGCT GCCCGTGCCC GCCGACGGCG TGAAGCTGGA AGCGCCGACC
ACCGCCTCGC CCAGCATCCG CCTGGTGATC CCCGCCGAGG AAATCGAGCG CCGCGCGCTG
GCCGAATACC GCCAGATCAT CGACAACGCC GCCCGCGAGG GCGCCCTCGC GCCGGACAGC
GTGCCGGACC TCGCCCGCAT CCGCGCCATC GTGCAGCGCC TGGTGCCGCA CGCGCCGCGC
TGGAACCCCG ACGCCGCGCA CTGGCAGTGG GAGGTCAACC TGATCGGCGC CGCGCAGGTC
AACGCGTTCT GCATGCCGGG CGGCAAGATC GCCGTGTTCT CCGGCCTGCT GGAGCGGTTC
AGGCTGACCG ACGACGAGCT CGCCATGGCG CTCGGCCACG AGATCGCCCA CGCGCTGCGC
GAACACGCCC GTGCCCGCGC CGGCCAGCGC GAGATCACCA ACCTGGGCGC CAATGTCATC
TCGCAGCTGT TCGGTTTCGG CAACCGCGGC GACGCCGGTT TCGGCGAGGG CGCCAAAATG
CACCTGCTGG CATTTTCCCG CGCCGAGGAA ACCGAGGCCG ACCTGATCGG CATGGATATC
GCCGCGCGCG CCGGTTTCGA TCCGCGCGCC GCGCTCACGC TGTGGCAGAA AATGGGCTCG
ATCGGGGGCG CCGAGCAGAA GCAGTTCCTG TCCACCCACC CGTCCGGGCG TTCGCGGATG
ACCGTGCTGT CGCGCCACCT GCCGGAAACG CTGCCGCTGT ACGCCGACGC CCTGCGGATG
CCGATGGCGA AACTGCCGGA GTACCGGTCG AATATGCAAT ATCTCGGCGC GGCCCCGGTC
GACAACGGGG ACGAGGCACC GATGCGGCCG ATGGTGCAGC AGTAG
 
Protein sequence
MPRLARSLPL LLGLGLAAWA GATDGPLPVP ADGVKLEAPT TASPSIRLVI PAEEIERRAL 
AEYRQIIDNA AREGALAPDS VPDLARIRAI VQRLVPHAPR WNPDAAHWQW EVNLIGAAQV
NAFCMPGGKI AVFSGLLERF RLTDDELAMA LGHEIAHALR EHARARAGQR EITNLGANVI
SQLFGFGNRG DAGFGEGAKM HLLAFSRAEE TEADLIGMDI AARAGFDPRA ALTLWQKMGS
IGGAEQKQFL STHPSGRSRM TVLSRHLPET LPLYADALRM PMAKLPEYRS NMQYLGAAPV
DNGDEAPMRP MVQQ