Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0153 |
Symbol | |
ID | 1218956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 172934 |
End bp | 173878 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236510 |
Product | putative signal peptide protein |
Protein accession | NP_518274 |
Protein GI | 17544872 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.700817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.82157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGCC TCGCGCGCTC CCTGCCCCTC CTGCTCGGAC TCGGCCTGGC CGCCTGGGCC GGCGCCACGG ACGGCCCGCT GCCCGTGCCC GCCGACGGCG TGAAGCTGGA AGCGCCGACC ACCGCCTCGC CCAGCATCCG CCTGGTGATC CCCGCCGAGG AAATCGAGCG CCGCGCGCTG GCCGAATACC GCCAGATCAT CGACAACGCC GCCCGCGAGG GCGCCCTCGC GCCGGACAGC GTGCCGGACC TCGCCCGCAT CCGCGCCATC GTGCAGCGCC TGGTGCCGCA CGCGCCGCGC TGGAACCCCG ACGCCGCGCA CTGGCAGTGG GAGGTCAACC TGATCGGCGC CGCGCAGGTC AACGCGTTCT GCATGCCGGG CGGCAAGATC GCCGTGTTCT CCGGCCTGCT GGAGCGGTTC AGGCTGACCG ACGACGAGCT CGCCATGGCG CTCGGCCACG AGATCGCCCA CGCGCTGCGC GAACACGCCC GTGCCCGCGC CGGCCAGCGC GAGATCACCA ACCTGGGCGC CAATGTCATC TCGCAGCTGT TCGGTTTCGG CAACCGCGGC GACGCCGGTT TCGGCGAGGG CGCCAAAATG CACCTGCTGG CATTTTCCCG CGCCGAGGAA ACCGAGGCCG ACCTGATCGG CATGGATATC GCCGCGCGCG CCGGTTTCGA TCCGCGCGCC GCGCTCACGC TGTGGCAGAA AATGGGCTCG ATCGGGGGCG CCGAGCAGAA GCAGTTCCTG TCCACCCACC CGTCCGGGCG TTCGCGGATG ACCGTGCTGT CGCGCCACCT GCCGGAAACG CTGCCGCTGT ACGCCGACGC CCTGCGGATG CCGATGGCGA AACTGCCGGA GTACCGGTCG AATATGCAAT ATCTCGGCGC GGCCCCGGTC GACAACGGGG ACGAGGCACC GATGCGGCCG ATGGTGCAGC AGTAG
|
Protein sequence | MPRLARSLPL LLGLGLAAWA GATDGPLPVP ADGVKLEAPT TASPSIRLVI PAEEIERRAL AEYRQIIDNA AREGALAPDS VPDLARIRAI VQRLVPHAPR WNPDAAHWQW EVNLIGAAQV NAFCMPGGKI AVFSGLLERF RLTDDELAMA LGHEIAHALR EHARARAGQR EITNLGANVI SQLFGFGNRG DAGFGEGAKM HLLAFSRAEE TEADLIGMDI AARAGFDPRA ALTLWQKMGS IGGAEQKQFL STHPSGRSRM TVLSRHLPET LPLYADALRM PMAKLPEYRS NMQYLGAAPV DNGDEAPMRP MVQQ
|
| |