Gene RSc0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0150 
Symbol 
ID1218953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand+ 
Start bp170473 
End bp171117 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID637236507 
Producthypothetical protein 
Protein accessionNP_518271 
Protein GI17544869 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.197759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.577731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC GCATTGCCGA TCACCCCATC GACCCGCTGT TCCTGGCGCG CTGGTCGCCG 
CGTGCCTACG ACGCCCGGCC CATGCCGCAC GCCGATCTGC TGTGCCTGCT GGAGGCCGCG 
CGGTGGGCGC CCTCGGCCTA CAACCATCAG CCGTGGCGCT TCCTTTATGC CCGCCGCGAC 
GACGCGCACT GGGCCGACTT CCTCGACCTG CTGGTGAGCG CCAACGGCGC CTGGGCGCAG 
CATGCGGCCG CGCTGGTCTT CGTGCTGTCC GATACGCGGC TCGATCGCGA TGGGGCGGTG 
GACGCCGTGC CGTCACGCAG CCACAGCTTC GATGCGGGCG CGGCGTGGGC ACAGCTGGCG 
CTGCAGGCCG TGCGGCTGGG CTACCACGCG CGCGCCATGG CGGGCGTCGA TTACGCGCGG 
GCGCGCACCG TGCTGAAGGT GCCGGAGCGC TTCCACATCG AGATCGCCGT GGCGGTCGGC 
CGCCGGGGCG CGCTCGCGTC GCTGCCGGCG CCGCTGCAGC CGCATGAAGG GCCGACGCCG 
CGCCGCGCCG CGCGCTCGAC GAACTGGCGT TCAGCGGGCC TTTTCCTGCC TGAAGGCGGC 
GCAATGCCGG GCCCCGGCTT GCTCAGTTAT TTCGATTTCA AATAA
 
Protein sequence
MHERIADHPI DPLFLARWSP RAYDARPMPH ADLLCLLEAA RWAPSAYNHQ PWRFLYARRD 
DAHWADFLDL LVSANGAWAQ HAAALVFVLS DTRLDRDGAV DAVPSRSHSF DAGAAWAQLA 
LQAVRLGYHA RAMAGVDYAR ARTVLKVPER FHIEIAVAVG RRGALASLPA PLQPHEGPTP 
RRAARSTNWR SAGLFLPEGG AMPGPGLLSY FDFK