Gene RSc0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0149 
Symbol 
ID1218952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp169848 
End bp170321 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID637236506 
Producttranscription regulator protein 
Protein accessionNP_518270 
Protein GI17544868 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.160744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.599627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCC TCCTTGCGCA ATGGCGGCGC GAGCGCCCCG ACCTCGACCC CAGCCCGATG 
GCCGTATGCG GCGAAGTCTG GCGCGCCGGC GAACGCCTGC GCCAGGGCGT GGTCGCGAAC
ATCGCCGACG CCGACCTGGA TCCGGCAGGC TTCGACGTGC TGCTGACGCT GCGCCGGCAG
GGGCGCGGCA ACACCCTCTC GCCATCTGCG CTGGCCAAGG ACATGATGCT GTCCACCTCG
GCCATGACCA ACCGGCTCGA CCGGCTCGAA AAGCGCGGAC TGATCGCCCG CCAGACCGAC
CCCGACGACC GTCGCGGCCT GCGCATCGTG CTGACCGATG CAGGCTTCGC GCTGGTCGAT
GGGCTGGTCG CCTCGCACCT GGTGACGGAG GAGCGCATGC TGGCGGCGTT GAGCCAGGCC
GAGCGCGCGA TGCTGCGCGA GCTGCTGGAG AAGATTGGCG GGCCGGTGGC CTGA
 
Protein sequence
MDSLLAQWRR ERPDLDPSPM AVCGEVWRAG ERLRQGVVAN IADADLDPAG FDVLLTLRRQ 
GRGNTLSPSA LAKDMMLSTS AMTNRLDRLE KRGLIARQTD PDDRRGLRIV LTDAGFALVD
GLVASHLVTE ERMLAALSQA ERAMLRELLE KIGGPVA