Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0149 |
Symbol | |
ID | 1218952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 169848 |
End bp | 170321 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236506 |
Product | transcription regulator protein |
Protein accession | NP_518270 |
Protein GI | 17544868 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.160744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.599627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCC TCCTTGCGCA ATGGCGGCGC GAGCGCCCCG ACCTCGACCC CAGCCCGATG GCCGTATGCG GCGAAGTCTG GCGCGCCGGC GAACGCCTGC GCCAGGGCGT GGTCGCGAAC ATCGCCGACG CCGACCTGGA TCCGGCAGGC TTCGACGTGC TGCTGACGCT GCGCCGGCAG GGGCGCGGCA ACACCCTCTC GCCATCTGCG CTGGCCAAGG ACATGATGCT GTCCACCTCG GCCATGACCA ACCGGCTCGA CCGGCTCGAA AAGCGCGGAC TGATCGCCCG CCAGACCGAC CCCGACGACC GTCGCGGCCT GCGCATCGTG CTGACCGATG CAGGCTTCGC GCTGGTCGAT GGGCTGGTCG CCTCGCACCT GGTGACGGAG GAGCGCATGC TGGCGGCGTT GAGCCAGGCC GAGCGCGCGA TGCTGCGCGA GCTGCTGGAG AAGATTGGCG GGCCGGTGGC CTGA
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Protein sequence | MDSLLAQWRR ERPDLDPSPM AVCGEVWRAG ERLRQGVVAN IADADLDPAG FDVLLTLRRQ GRGNTLSPSA LAKDMMLSTS AMTNRLDRLE KRGLIARQTD PDDRRGLRIV LTDAGFALVD GLVASHLVTE ERMLAALSQA ERAMLRELLE KIGGPVA
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