Gene RSc0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0145 
Symbol 
ID1218948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp166728 
End bp167636 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID637236502 
Productputative transmembrane protein 
Protein accessionNP_518266 
Protein GI17544864 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.943019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAG TCACGGCAAG CAAGCTGCCG CTCAAGCTGC TCGCGCTCGT CTTCGGCGCC 
GTGCTGGCGC TCGCGGTCGC GCGCACCTTC CTGCTGACCT GGCAGATCAT TCCGCCGGGC
TACACCGGCA TCAAGATCAA CCGGCTCGTG GACCGCGGCA TCACGCGCGA GAACGTGGTC
ACCGGCTTCG TGTTCTACAA CCCGGTGCAG ACCGCGCTCA TCCAGTACCC GACCTTCGTC
CAGCGGGTCA TCTGGACGCA GGACGTCAAC GAAGGCCACG CGCTCAACGA GGAGCTGACC
TTCAACACGA AAGACGCCGT GCCGGTCAAT GTCGACGTGG CGGTGTCGTA CCAGCTCGAT
CGCGACAAGG TGCCCGACTT CTACACGAAC TTCCGCGCCG ACCGCATCGA CAGCTTCACG
CACGGCTACC TGCGCGACAC GGCGCGCAAC ATCATCGTCG CCATCGGCTC GGAATACAGC
TTCGACGACG TGAACGGCGC CAGGAAGGAG GAGTTCGTCT CGCGCCTGAC CAGGGAACTG
GATGCGCGGC TGATGCCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGTTCGCTG
CGGCCGCCGC GCGCGCTGCT CGATGCGGTC AGCGCCAAGA CCAAGGCCAT CCAGGATGCG
ATCCGCACGG AGAACGAAGT CCGCTCCGCG CAGGCCGAGG CCAAGAAGAA GGTGGCGATC
GCCGAAGGCG AAGCGGCCGC GAACCACGCG CTGGCGTCCT CGCTGGATGA CCGCCTGCTG
GCCTGGGAGC GCCTGAAGCT GGAGCGCGCC GCCATCGAGA AATGGAATGG CGTGACGCCG
AGCGTCATGG GCGGCACGAG CGGAGGTGGC ATGCTGTTCA ACATCCCCAT GGGACCGCAG
AGCCGATGA
 
Protein sequence
MPQVTASKLP LKLLALVFGA VLALAVARTF LLTWQIIPPG YTGIKINRLV DRGITRENVV 
TGFVFYNPVQ TALIQYPTFV QRVIWTQDVN EGHALNEELT FNTKDAVPVN VDVAVSYQLD
RDKVPDFYTN FRADRIDSFT HGYLRDTARN IIVAIGSEYS FDDVNGARKE EFVSRLTREL
DARLMPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI
AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMGGTSGGG MLFNIPMGPQ
SR