| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0145 |
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| Symbol | |
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| ID | 1218948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 166728 |
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| End bp | 167636 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637236502 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_518266 |
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| Protein GI | 17544864 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.943019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAAG TCACGGCAAG CAAGCTGCCG CTCAAGCTGC TCGCGCTCGT CTTCGGCGCC
GTGCTGGCGC TCGCGGTCGC GCGCACCTTC CTGCTGACCT GGCAGATCAT TCCGCCGGGC
TACACCGGCA TCAAGATCAA CCGGCTCGTG GACCGCGGCA TCACGCGCGA GAACGTGGTC
ACCGGCTTCG TGTTCTACAA CCCGGTGCAG ACCGCGCTCA TCCAGTACCC GACCTTCGTC
CAGCGGGTCA TCTGGACGCA GGACGTCAAC GAAGGCCACG CGCTCAACGA GGAGCTGACC
TTCAACACGA AAGACGCCGT GCCGGTCAAT GTCGACGTGG CGGTGTCGTA CCAGCTCGAT
CGCGACAAGG TGCCCGACTT CTACACGAAC TTCCGCGCCG ACCGCATCGA CAGCTTCACG
CACGGCTACC TGCGCGACAC GGCGCGCAAC ATCATCGTCG CCATCGGCTC GGAATACAGC
TTCGACGACG TGAACGGCGC CAGGAAGGAG GAGTTCGTCT CGCGCCTGAC CAGGGAACTG
GATGCGCGGC TGATGCCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGTTCGCTG
CGGCCGCCGC GCGCGCTGCT CGATGCGGTC AGCGCCAAGA CCAAGGCCAT CCAGGATGCG
ATCCGCACGG AGAACGAAGT CCGCTCCGCG CAGGCCGAGG CCAAGAAGAA GGTGGCGATC
GCCGAAGGCG AAGCGGCCGC GAACCACGCG CTGGCGTCCT CGCTGGATGA CCGCCTGCTG
GCCTGGGAGC GCCTGAAGCT GGAGCGCGCC GCCATCGAGA AATGGAATGG CGTGACGCCG
AGCGTCATGG GCGGCACGAG CGGAGGTGGC ATGCTGTTCA ACATCCCCAT GGGACCGCAG
AGCCGATGA
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| Protein sequence | MPQVTASKLP LKLLALVFGA VLALAVARTF LLTWQIIPPG YTGIKINRLV DRGITRENVV
TGFVFYNPVQ TALIQYPTFV QRVIWTQDVN EGHALNEELT FNTKDAVPVN VDVAVSYQLD
RDKVPDFYTN FRADRIDSFT HGYLRDTARN IIVAIGSEYS FDDVNGARKE EFVSRLTREL
DARLMPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI
AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMGGTSGGG MLFNIPMGPQ
SR
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