Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0143 |
Symbol | |
ID | 1218946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 165027 |
End bp | 165554 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236500 |
Product | hypothetical protein |
Protein accession | NP_518264 |
Protein GI | 17544862 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.339156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA TCGTCTGGCC CGAGCGTTTC CTGCCGGGCA CCACCGACAA CTATGTTTCC AACGAGACCA TCGTGGCCGG CCTGCGCGCG GCCGACGTAT GGCCCTGGCT GAACGACACC GCGGTCTGGC CGGCCTGCTA CGGCAACGTC TCGGACATCC GCTTCCATGA CGGCTCGGGG CCCGGGCTGC GCCATGGTGC CCGTTTCCGC TTCACGACCT TCAGCTTCCC CGTGGAGGCG GAGGTGACCG AGTACGAGCC GCCCGCTGGC GGCAAGCCGG CCCGCATCGC CTGGCACGGC TGGGTCGAGG GCGATGCGCA GGCGCGGCTG GACGTGCACC ATGCCTGGCT GTTCGAGGAC CTGCCCGGCG GCCGCGTGCG CATCCTCACG CAAGAGACGC AGATCGGCGA ACCGGCCCGG GAACTGGCGC GGACGCTGCC CAACCCCATG CTCAATGCCC ACCAGGCGTG GGTCGACGGT CTGGCGCGCA GCGCGGTCGA GGGCGTGCGC GCGGCAGCCG GTCGGTAA
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Protein sequence | MSEIVWPERF LPGTTDNYVS NETIVAGLRA ADVWPWLNDT AVWPACYGNV SDIRFHDGSG PGLRHGARFR FTTFSFPVEA EVTEYEPPAG GKPARIAWHG WVEGDAQARL DVHHAWLFED LPGGRVRILT QETQIGEPAR ELARTLPNPM LNAHQAWVDG LARSAVEGVR AAAGR
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