Gene RSc0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0143 
Symbol 
ID1218946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp165027 
End bp165554 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID637236500 
Producthypothetical protein 
Protein accessionNP_518264 
Protein GI17544862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.339156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TCGTCTGGCC CGAGCGTTTC CTGCCGGGCA CCACCGACAA CTATGTTTCC 
AACGAGACCA TCGTGGCCGG CCTGCGCGCG GCCGACGTAT GGCCCTGGCT GAACGACACC
GCGGTCTGGC CGGCCTGCTA CGGCAACGTC TCGGACATCC GCTTCCATGA CGGCTCGGGG
CCCGGGCTGC GCCATGGTGC CCGTTTCCGC TTCACGACCT TCAGCTTCCC CGTGGAGGCG
GAGGTGACCG AGTACGAGCC GCCCGCTGGC GGCAAGCCGG CCCGCATCGC CTGGCACGGC
TGGGTCGAGG GCGATGCGCA GGCGCGGCTG GACGTGCACC ATGCCTGGCT GTTCGAGGAC
CTGCCCGGCG GCCGCGTGCG CATCCTCACG CAAGAGACGC AGATCGGCGA ACCGGCCCGG
GAACTGGCGC GGACGCTGCC CAACCCCATG CTCAATGCCC ACCAGGCGTG GGTCGACGGT
CTGGCGCGCA GCGCGGTCGA GGGCGTGCGC GCGGCAGCCG GTCGGTAA
 
Protein sequence
MSEIVWPERF LPGTTDNYVS NETIVAGLRA ADVWPWLNDT AVWPACYGNV SDIRFHDGSG 
PGLRHGARFR FTTFSFPVEA EVTEYEPPAG GKPARIAWHG WVEGDAQARL DVHHAWLFED
LPGGRVRILT QETQIGEPAR ELARTLPNPM LNAHQAWVDG LARSAVEGVR AAAGR