| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0142 |
|---|
| Symbol | argC |
|---|
| ID | 1218945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 163788 |
|---|
| End bp | 164801 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637236499 |
|---|
| Product | N-acetyl-gamma-glutamyl-phosphate reductase |
|---|
| Protein accession | NP_518263 |
|---|
| Protein GI | 17544861 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0002] Acetylglutamate semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01851] N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCA AGGTTTTCGT CGACGGTCAG GAAGGCACCA CCGGCCTTCG TCTGCTCGAC
TATCTGTCGC AGCGCGACGA TATCGAGCTC CTGCGCATCG CCGAAGACCG ACGCAAGGAC
CCGGCCGAGC GCGCCAAATT CCTGAACGCC GCCGACGTGG CCTTCCTGTG CCTGCCGGAC
GTCGCTTCGC GCGAGGCCGT GTCGCTGGTC GACAACCCCA ACACCTGCAT CATCGACGCC
AGCACCGCGT TCCGCACCTC GGACGACTGG GCCTACGGCC TGCCCGAGCT GGCGCCCGGC
CAGCGCGAGC GCCTGCGCAA CAGCAAGCGC ATCGCCGTGC CCGGCTGCCA CGCCAGCGCC
TTCGTGCTGC TGATGCGCCC GCTGGTGGAG GCCGGCATCG TTCCGGCGGA TTACCCCATC
ACCGCGTTCT CGCTGACCGG CTACAGCGGC GGCGGCAAGA AGATGATCGC CGACTACCTC
GCCGCCGATA ACCCCAAGCT GCAGAGCCCG CGTCCCTACG CGCTGGCGTT GACGCACAAG
CACCTGCCCG AGATGCGCGT GCAGAGCAAG CTGGCCCTGC CGCCGATCTT CACGCCGGTG
GTGGGCAACT TCCTGAAGGG TCTGGCCGTG ACGATCGGCC TGCATCCGCA GCACCTGGCG
AGCAAGGTCA GCCCGGCCGA TATCGCCAAG GTCTTCGCCG ACTACTACCA GGGCGAGCAG
TTCATCCGCG TCGCCCCGGC CGACAACGTC GAGACGCTCG ACAACGGCTT CTTCGACGTG
CAGGGCGCCA ACGACACCAA CCGCGCCGAC CTGTTCGTGT TCGGCTCGGA CGAGCGCATG
GTCGTCACCG CCCGCCTGGA CAACCTGGGC AAGGGCGCGG CCGGCGCCGC CGTGCAGTGC
ATGAACGTGC ACCTGGGCGT GGACGAGGCG ACCAGCCTGC ACGTCGAAGC CCCCGTCAAG
GCCGAAGGCC CGGCGCACCC GGTGCGCGAG GCCGCGCCGG ATTTCGCGAC CTGA
|
|---|
| Protein sequence | MAFKVFVDGQ EGTTGLRLLD YLSQRDDIEL LRIAEDRRKD PAERAKFLNA ADVAFLCLPD
VASREAVSLV DNPNTCIIDA STAFRTSDDW AYGLPELAPG QRERLRNSKR IAVPGCHASA
FVLLMRPLVE AGIVPADYPI TAFSLTGYSG GGKKMIADYL AADNPKLQSP RPYALALTHK
HLPEMRVQSK LALPPIFTPV VGNFLKGLAV TIGLHPQHLA SKVSPADIAK VFADYYQGEQ
FIRVAPADNV ETLDNGFFDV QGANDTNRAD LFVFGSDERM VVTARLDNLG KGAAGAAVQC
MNVHLGVDEA TSLHVEAPVK AEGPAHPVRE AAPDFAT
|
|---|
| |