Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0141 |
Symbol | |
ID | 1218944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 163152 |
End bp | 163652 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236498 |
Product | hypothetical protein |
Protein accession | NP_518262 |
Protein GI | 17544860 |
COG category | [S] Function unknown |
COG ID | [COG4682] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.937216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGC AAGTCCAACC GCCGTCGTTC GCATTCGTTG CCGTCTCGTG GACGGCCTTG CTGCTCGGGT TTGCCGCCTA CCTGATCGGT GTGTGGAACG CGAACATGCA GCTCAACGAG CGCGGCTATT ACTTCACCGT CCTCGTCTAC GGGCTGTTCG CGGCGGTGTC GGTGCAGAAG TCCGTGCGCG ACCGGGTCGA AGACGTTCCG GTCACCGGCA TTTACTACGG CCTGTGCTGG CTGTCCGCGC TGCTGGCGGT GGGGCTGCTG TGCGTCGGAC TCTACAACGC CACGCTGGCC CAGAGCGAGA AGGGCTTCTT CGGCATGGCC TACGCGCTGG CGCTGTTCGG CGCCATTGCT GTCCAGAAGA ACACCCGCGA CATCACCGCA ACCAAGCCGG TGACCCTGGA GGCACGCCTG GCCCAGTTGC GCGAGGAGGC GCCCAAGGCG CCGGCGTTGA ACCCGGCCGC GGCATCCGAG ACGCCGGTGC GCCGCGGCTG A
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Protein sequence | MKPQVQPPSF AFVAVSWTAL LLGFAAYLIG VWNANMQLNE RGYYFTVLVY GLFAAVSVQK SVRDRVEDVP VTGIYYGLCW LSALLAVGLL CVGLYNATLA QSEKGFFGMA YALALFGAIA VQKNTRDITA TKPVTLEARL AQLREEAPKA PALNPAAASE TPVRRG
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