| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0137 |
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| Symbol | dapF |
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| ID | 1218940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 159639 |
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| End bp | 160517 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236494 |
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| Product | diaminopimelate epimerase |
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| Protein accession | NP_518258 |
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| Protein GI | 17544856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC ACTTCACCAA GATGCACGGC GCCGGCAACG ACTTCGTCGT GCTCGACGGC
ATCGCGACCC CGATCGATTT CACCCCCGAA CAGTGGCGCG CCATCGCCGA CCGCCACTTC
GGCGTGGGCG CGGACCAGCT GCTGCTGGTG GAGCGTTCCA CCCGCCCCGA CGTCGATTTC
CGCTACCGCA TCTTCAACCA CGACGGCGGC GAGGTGGAGC AGTGCGGCAA CGGCGCGCGC
TGCTTCGTCA AGTTCGTTAC CGACCGTGGC CTGACCGACA AGCGCACCAT CCGCGTCGAA
GTGATGAACG GCATCTCCAC GCTGACGATG CAGCCCGACG GCCAGGTGAC GGTCGACATG
GGCGCCCCGG TGTTCGAGGC CGCGCGCCTG CCCTTCGTGC CCGATGCCCT GCCCACCCGC
GTGGAAGGCC GCGACACGCA GCACGCCCTG CAGATCAACG GCCGCACCGC GTGGCTGTCC
ACCGTGTCGA TGGGCAACCC GCACGCGGTG CAGGTGGTCG ATGACGCGGA AGCCTTCCCG
GTGCGCGAAG ACGGCCCGTT GATCGAATCG CACGCTGTGT TCCCGAGGCG CGTGAATGCC
GGCTTCATGG AGATCGCCGA CCGCCACGCC ATCCGCCTGC GCGTGTACGA GCGCGGCGCC
GGCGAGACGC TGGCCTGTGG CACGGGCGCC TGCGCGGCGG CGGTGGCGGG GATCCGGCGC
GGCCTGCTGG ATTCGCCCGT CAAGGTGACC ACGCACGGCG GCGACCTGAC CATCGCCTGG
GCCGGCGAGG GCGAGCCGGT GATGATGACC GGCCCGGCCA CGACCGTGTT CGAAGGCACG
CTGGACCTGG ACGCACTGAA GCAGACCGCC GCGCACTGA
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| Protein sequence | MKLHFTKMHG AGNDFVVLDG IATPIDFTPE QWRAIADRHF GVGADQLLLV ERSTRPDVDF
RYRIFNHDGG EVEQCGNGAR CFVKFVTDRG LTDKRTIRVE VMNGISTLTM QPDGQVTVDM
GAPVFEAARL PFVPDALPTR VEGRDTQHAL QINGRTAWLS TVSMGNPHAV QVVDDAEAFP
VREDGPLIES HAVFPRRVNA GFMEIADRHA IRLRVYERGA GETLACGTGA CAAAVAGIRR
GLLDSPVKVT THGGDLTIAW AGEGEPVMMT GPATTVFEGT LDLDALKQTA AH
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