Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0136 |
Symbol | |
ID | 1218939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 158667 |
End bp | 159560 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236493 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | NP_518257 |
Protein GI | 17544855 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGTT TCACTGCCAA ACTCGGACTC GGCTTCCTGT GGCTGCTGTC CTTCTTCCCG TACGGTTTCG TCGCCCGCTT CGGCGAAGGG CTGGGCGGGC TGCTGTATCG CATCCCCAAC GGCCGCCGCC GCGTGGTGCT GGCCAACCTG AAGGCGTGCT TCCCCGAAAA GTCCGACGCC GAGCGCGAGG CCATCGCGCA CGAGGTCTTC CGCAAGGTGT TCCGCAGCTT CGCCGAGCGC TCGTTCGCGT GGTTCGCGTC CGAGCAGCGG CTCAAGCGCG TGGTGAAGAT CGACGACCAA GCCAACCTGC CCGCACTGCA CGGCTCGCCG CACATTCTCG TCACGCTGCA CCTGTCGGGC GTGGAGATCG GCGCGCTGGC GCTGACGGAC TACCTGCGCG AGCACGTCGG CAACGCCGGC TGCTCGCTCT ACACGCGCAT GGCCAACCCG GCGCTGGATG CGGCGATCAA GGCGCTGCGC AGCCGCTTCG GCGCGACCAT GGTGTCGCGC AACGAGAACA TCCGCCAGAT CATGCGCACC ATCAAGCGCG GCGAGGCGCT GCAGCTGATC TCCGACATGG ACTTCGGCGA GCGCGACGCC GAGTTCGTGC CGTTTTTCGG CGTGCAAGCG CTCACGCTCA ACGCCATCCC GCGCATGGCC GCGCTGACCG GCGCCAGGGT GGTCCCGATG TACACCGAGA TCCTGCCGGA CTACCAGGGC TACGTGCTGC GCATCCTGCC GGCCTGGGAC GACTATCCGA CCGGCGACCT GAGCGCCGAT ACGCGCCGCA TGAACGCCTT CTTCGAAGAC GCCATCCGCC CGCGCATCAC CGAGTACTAC TGGGTGCACA AGCGCTTCAA GCATCGCCCG CCCGGCGAGC CGGGCATCTA CTGA
|
Protein sequence | MERFTAKLGL GFLWLLSFFP YGFVARFGEG LGGLLYRIPN GRRRVVLANL KACFPEKSDA EREAIAHEVF RKVFRSFAER SFAWFASEQR LKRVVKIDDQ ANLPALHGSP HILVTLHLSG VEIGALALTD YLREHVGNAG CSLYTRMANP ALDAAIKALR SRFGATMVSR NENIRQIMRT IKRGEALQLI SDMDFGERDA EFVPFFGVQA LTLNAIPRMA ALTGARVVPM YTEILPDYQG YVLRILPAWD DYPTGDLSAD TRRMNAFFED AIRPRITEYY WVHKRFKHRP PGEPGIY
|
| |