Gene RSc0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0136 
Symbol 
ID1218939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp158667 
End bp159560 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID637236493 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionNP_518257 
Protein GI17544855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT TCACTGCCAA ACTCGGACTC GGCTTCCTGT GGCTGCTGTC CTTCTTCCCG 
TACGGTTTCG TCGCCCGCTT CGGCGAAGGG CTGGGCGGGC TGCTGTATCG CATCCCCAAC
GGCCGCCGCC GCGTGGTGCT GGCCAACCTG AAGGCGTGCT TCCCCGAAAA GTCCGACGCC
GAGCGCGAGG CCATCGCGCA CGAGGTCTTC CGCAAGGTGT TCCGCAGCTT CGCCGAGCGC
TCGTTCGCGT GGTTCGCGTC CGAGCAGCGG CTCAAGCGCG TGGTGAAGAT CGACGACCAA
GCCAACCTGC CCGCACTGCA CGGCTCGCCG CACATTCTCG TCACGCTGCA CCTGTCGGGC
GTGGAGATCG GCGCGCTGGC GCTGACGGAC TACCTGCGCG AGCACGTCGG CAACGCCGGC
TGCTCGCTCT ACACGCGCAT GGCCAACCCG GCGCTGGATG CGGCGATCAA GGCGCTGCGC
AGCCGCTTCG GCGCGACCAT GGTGTCGCGC AACGAGAACA TCCGCCAGAT CATGCGCACC
ATCAAGCGCG GCGAGGCGCT GCAGCTGATC TCCGACATGG ACTTCGGCGA GCGCGACGCC
GAGTTCGTGC CGTTTTTCGG CGTGCAAGCG CTCACGCTCA ACGCCATCCC GCGCATGGCC
GCGCTGACCG GCGCCAGGGT GGTCCCGATG TACACCGAGA TCCTGCCGGA CTACCAGGGC
TACGTGCTGC GCATCCTGCC GGCCTGGGAC GACTATCCGA CCGGCGACCT GAGCGCCGAT
ACGCGCCGCA TGAACGCCTT CTTCGAAGAC GCCATCCGCC CGCGCATCAC CGAGTACTAC
TGGGTGCACA AGCGCTTCAA GCATCGCCCG CCCGGCGAGC CGGGCATCTA CTGA
 
Protein sequence
MERFTAKLGL GFLWLLSFFP YGFVARFGEG LGGLLYRIPN GRRRVVLANL KACFPEKSDA 
EREAIAHEVF RKVFRSFAER SFAWFASEQR LKRVVKIDDQ ANLPALHGSP HILVTLHLSG
VEIGALALTD YLREHVGNAG CSLYTRMANP ALDAAIKALR SRFGATMVSR NENIRQIMRT
IKRGEALQLI SDMDFGERDA EFVPFFGVQA LTLNAIPRMA ALTGARVVPM YTEILPDYQG
YVLRILPAWD DYPTGDLSAD TRRMNAFFED AIRPRITEYY WVHKRFKHRP PGEPGIY