Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0135 |
Symbol | |
ID | 1218938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 157732 |
End bp | 158649 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236492 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | NP_518256 |
Protein GI | 17544854 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.455376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGGACG GCGATTCGAG GCCCTTTTTT CCCCTGTCTC ACGCGACCAA CACTCCCGCG CATGCACGCA TGACCTTCCT GTTCTGGCTG TTTTCACGCT GGCCCTTGTC GTGGCTGCAG GCGCTGGGCG GCTGGCTGGG AGCCTTGGCG GCACGGGTGC CGGGCCGCTA TCACGACCGG CTCGTCGCCA ATTTCCGCCA CGCCTATCCC GACGTCACGC CCGCCATGCT CAAGGAAGCG GGGCGATCCG CCGGCCGCAT GGTGTTCGAG ATGCCGTACT TCTGGATGCG CAAGAACGGG ACGGACATCA CGCCGGACCT GATCGACGAC TGCTGGCCGA CTTGCGAGCG CCTGCTAGAG AACGGCCGCG GCGTCATTTT CTTGACCCCG CACCTGGGTT GCTTTGAAGT GCTGCCGCAG GCTTACGCGC GGCGCCTGCC GGTCACGTCG ATGTTCAAGC CGCCCCACCA GGAAAGCTTG CGCGCCTGGA TCGAGCGCAT GCGCACGCGG CCGAACATGC AGATGGCGCC CGCCGACTCG CGCGGCGTGC GCATGGTGGT GCGCGCACTC AAACGAGGCG AGGCTGTAGG CATCCTGCCC GACCAGACGC CCACGGCGGG CGAGGGCGTC TGGGCGCCGT TCTTCGGCAA GCCCGCCTAT ACGATGACGC TGGTGCACCG CCTGCACCGG CTGACCGGTG CCCCTGTGGC CGTGGTGTTC AGCGAGCGCC TGCCGCGCGG CAAGGGCTAT CGTCTACACC TGCGTGTGAT CGGTGATTTA CCCGAAGACG CGACTGCCGC CGCCACCCGC ATCAACGCCG AAATCGAACA GTTGATTGCC CTGGCACCGA CGCAATATCT CTGGGGCTAT AACCGCTACA AGCGACCGAA GGGCGTGGAC GCCCCGCCCG CTGCCTGA
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Protein sequence | MPDGDSRPFF PLSHATNTPA HARMTFLFWL FSRWPLSWLQ ALGGWLGALA ARVPGRYHDR LVANFRHAYP DVTPAMLKEA GRSAGRMVFE MPYFWMRKNG TDITPDLIDD CWPTCERLLE NGRGVIFLTP HLGCFEVLPQ AYARRLPVTS MFKPPHQESL RAWIERMRTR PNMQMAPADS RGVRMVVRAL KRGEAVGILP DQTPTAGEGV WAPFFGKPAY TMTLVHRLHR LTGAPVAVVF SERLPRGKGY RLHLRVIGDL PEDATAAATR INAEIEQLIA LAPTQYLWGY NRYKRPKGVD APPAA
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