Gene RSc0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0135 
Symbol 
ID1218938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp157732 
End bp158649 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID637236492 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionNP_518256 
Protein GI17544854 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.455376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGACG GCGATTCGAG GCCCTTTTTT CCCCTGTCTC ACGCGACCAA CACTCCCGCG 
CATGCACGCA TGACCTTCCT GTTCTGGCTG TTTTCACGCT GGCCCTTGTC GTGGCTGCAG
GCGCTGGGCG GCTGGCTGGG AGCCTTGGCG GCACGGGTGC CGGGCCGCTA TCACGACCGG
CTCGTCGCCA ATTTCCGCCA CGCCTATCCC GACGTCACGC CCGCCATGCT CAAGGAAGCG
GGGCGATCCG CCGGCCGCAT GGTGTTCGAG ATGCCGTACT TCTGGATGCG CAAGAACGGG
ACGGACATCA CGCCGGACCT GATCGACGAC TGCTGGCCGA CTTGCGAGCG CCTGCTAGAG
AACGGCCGCG GCGTCATTTT CTTGACCCCG CACCTGGGTT GCTTTGAAGT GCTGCCGCAG
GCTTACGCGC GGCGCCTGCC GGTCACGTCG ATGTTCAAGC CGCCCCACCA GGAAAGCTTG
CGCGCCTGGA TCGAGCGCAT GCGCACGCGG CCGAACATGC AGATGGCGCC CGCCGACTCG
CGCGGCGTGC GCATGGTGGT GCGCGCACTC AAACGAGGCG AGGCTGTAGG CATCCTGCCC
GACCAGACGC CCACGGCGGG CGAGGGCGTC TGGGCGCCGT TCTTCGGCAA GCCCGCCTAT
ACGATGACGC TGGTGCACCG CCTGCACCGG CTGACCGGTG CCCCTGTGGC CGTGGTGTTC
AGCGAGCGCC TGCCGCGCGG CAAGGGCTAT CGTCTACACC TGCGTGTGAT CGGTGATTTA
CCCGAAGACG CGACTGCCGC CGCCACCCGC ATCAACGCCG AAATCGAACA GTTGATTGCC
CTGGCACCGA CGCAATATCT CTGGGGCTAT AACCGCTACA AGCGACCGAA GGGCGTGGAC
GCCCCGCCCG CTGCCTGA
 
Protein sequence
MPDGDSRPFF PLSHATNTPA HARMTFLFWL FSRWPLSWLQ ALGGWLGALA ARVPGRYHDR 
LVANFRHAYP DVTPAMLKEA GRSAGRMVFE MPYFWMRKNG TDITPDLIDD CWPTCERLLE
NGRGVIFLTP HLGCFEVLPQ AYARRLPVTS MFKPPHQESL RAWIERMRTR PNMQMAPADS
RGVRMVVRAL KRGEAVGILP DQTPTAGEGV WAPFFGKPAY TMTLVHRLHR LTGAPVAVVF
SERLPRGKGY RLHLRVIGDL PEDATAAATR INAEIEQLIA LAPTQYLWGY NRYKRPKGVD
APPAA