| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0127 |
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| Symbol | |
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| ID | 1218930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 148456 |
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| End bp | 149898 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236484 |
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| Product | putative hemagglutinin-related protein |
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| Protein accession | NP_518248 |
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| Protein GI | 17544846 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACCCT GTCCTTCGGA GGCGCCGCGC GTCCTGCATG CGCTCACGCG GCGCGGCATG
GCGCTGGCGC TCGCGGCCAC GCTGTCGCTC GTGCTGTCCG CCTGCGGCGG CGGGGGCGAT
GACACGGCCG CGGCCACCAC GGCGCCGCCG TCGAGCAACG CCGTGACGCC GTCACCCTCA
CCGGCGCCCG CGCCGACCTA CTCGGTGGGC GGCACGGTAG CCGGCCTGGG CTCGGGCCTG
TCGGTGAAGC TGCTGAACAA CGGCGGCGAC GCGGTCACCG TCACCGCCAA CGGCAACTTC
CAGTTCCCCA CCGCGCTGGC GAGCGGCGCG CAATACGCGG CGACCGTGGG CACGCGCCCA
TCGGGGCAAC AGTGCACGAT CGCCAACGAC AGCGGCACGA TGGGCTCGGC CAACGTCACC
AACATCGCCG TGACCTGTTC GACGCGGCCG CTGTTCGCCT ATACGGCCAA CTCGAACGAC
AACACGGTCT CCGCCTACAC GCTGGACCCG ACCACCGGCG CACCGACCCT GATCGGCACA
CCCATCTCGG TAGGCCAAGG GCCGCTGTCG CTGATCGCGG ACAAGGCCGG CAAGTTCGTC
TACGTCGTCG ACGGCAACGA CAACAGCGTC ACCACGCTGG CGATCGATTC GGAGACCGGC
CTGCTGACCA TCTCGGGCAC GCCGGCCACA ACGGGGATGC AGCCGTTCAA CATCGCGCGC
ACGCCGGCCA GCACGTTCGC GTACACCACC AACTTCGGCG ACAACACCCT GTCGGGCTTC
TCGATCAACG CGACGACCGG CGTGCTCACC TCGATCGGCA CCATCGCGGC GGGCACCAAT
CCGTACACCA TCGTCATCAA CAAGGCCGGC ACCTTCGCCT ACGTGGTGAA CGCGGCCAGC
GGGGCGGGCA CGCCATCGGC CATGGTCTTC TCGATCAACG GCGCCACCGG CGCGCTCACA
GCGGTGGGCA GCCCGGTCGC CACCGGCAAC GCACCGTTCT ACATCGCGCT GCATCCGGCC
GGCACGTTCG CCTACGTGGC CAACTCGCAG GACAACACCG TCCAGGTATA TGCCATCAAC
CAGACCACCG GCGCGCTGAC CGCCGTGGGC TCGCCGGTGG CCACCGGGCA GGGGCCGATC
CCGATCGCCA TCCATCCGTC CGGCCTGTTC GCGTACGTGG GCAACGTGTT CGATAACACG
GTCAGCCTCT ACGCCATCAA CACAGGCACC GGCGCGCTGA CGCTCAAGAG CACGCTCGCC
ACCGGCAACG ATCCGCTGGC GATCACGCTC AACGATGCCG GCAGCATCGC CTACATCGTC
AACGGCGTGG ACCATGACGT GGTCGCCTAC GCGGTGGACA GCAGCACCGG TGCGCTGACC
TCGGTCGCTA CCGCGCAGAC CGGGCTGCTG CCGCGCGCGT TCGCCATCGT GGCGGTGCCG
TAA
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| Protein sequence | MQPCPSEAPR VLHALTRRGM ALALAATLSL VLSACGGGGD DTAAATTAPP SSNAVTPSPS
PAPAPTYSVG GTVAGLGSGL SVKLLNNGGD AVTVTANGNF QFPTALASGA QYAATVGTRP
SGQQCTIAND SGTMGSANVT NIAVTCSTRP LFAYTANSND NTVSAYTLDP TTGAPTLIGT
PISVGQGPLS LIADKAGKFV YVVDGNDNSV TTLAIDSETG LLTISGTPAT TGMQPFNIAR
TPASTFAYTT NFGDNTLSGF SINATTGVLT SIGTIAAGTN PYTIVINKAG TFAYVVNAAS
GAGTPSAMVF SINGATGALT AVGSPVATGN APFYIALHPA GTFAYVANSQ DNTVQVYAIN
QTTGALTAVG SPVATGQGPI PIAIHPSGLF AYVGNVFDNT VSLYAINTGT GALTLKSTLA
TGNDPLAITL NDAGSIAYIV NGVDHDVVAY AVDSSTGALT SVATAQTGLL PRAFAIVAVP
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