| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0123 |
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| Symbol | |
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| ID | 1218926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 145024 |
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| End bp | 146748 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236480 |
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| Product | putative alcohol dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518244 |
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| Protein GI | 17544842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC CCGCCGCCCC GCTCACCTTC GACTACGTCA TCGTCGGCGC AGGCTCGGCC
GGCTGCGCGC TGGCGAGCCG CCTGACCGAA GACCCCGACG TGACGGTCGC GCTGCTGGAG
GCCGGGCCGC ACGATCATCA TTTCTCCGTG TGGGTGCCGG CGGGCTACGC GGCCTCGCTG
CCGTTCCGGA GCCGGCGCAA CTACGCCTAC CTGACCACGC CGCAGCCGGG ACTGGGCGGG
CGTCAGGGGT ATCAGCCGCG CGGGCGCGGT CTGGGCGGCA GCTCATCGCT CAACGCGATG
ATCTACACCC GCGGCCACCG GCACGACTAC GACCACTGGG CCGCGCTCGG CTGCACCGGC
TGGGGCTGGG ACAGCGTGCT GCCCTACTTC AAGCGGTCGG AATGCAACGC GCGTGTCGCG
GGCCGCGACG ATGATCCGCT GCACGGCGGC AACGGCCCGC TGCACGTGAG CGACCTGCGC
ACCGACAATC CGATCGCGCA GCGCTTCGTG GAAGCGGCGG TGGCGGCGGG CTACCGCCGC
AACGATGATT TCAACGGCCC CGAACAGGAA GGGGTCGGGC TCTACCAGGT CACGCAATAC
AACGGGGAGC GCTGGAACGC CGCGCGCGCC TACCTGCACG GCGGTGACAG GGCCGACACC
ACGTTCAACC GCGGACGGCG CCGGCTGACG GTGCTGCCCG ACACGCAGGC GCTGCGCATC
GTCTTCGAGG ACAGGCGCGC GACGGGCGTG GTGGTGGACC GCGCCGGCCG CACCGAGACG
CTGCACGCAC GGCGCGAGGT CATCGTGTCA TCGGGGACGT TCGGTTCGCC GCAGTTGCTG
ATGGCCTCGG GCGTGGGTCC GGCCGCGCAG CTGCGCGCGC TGGGGATTCC GGTGGTGCAG
GACCTGCCCG GCGTCGGCCA GAACCTGCAG GACCACCTCG ACGTGATCCT GCACAAGAAG
CTGTTCAACC TCGACCTGGT CGGCTATTCG CTGCGCGGCA GCGTGCGCAT GCTGGGCGAG
ATCCTGCGCT ACCGGCGCGA GCGCCGCGGC ATGATCGCCA CCAACTTCGC CGAGGCGGGC
GGCTTCATCA AGAGCCGGCC CGGCCTGCTT GAACCGGACC TGCAACTGCA TTTCGTGGTC
GCCATGGCCG ACAACCACAA CCGCACGTTC CACTACGGCC ACGGCTATTC GTGCCACGCA
TGCGTGCTGC GCCCGGAAAG CCGCGGCGAG GTGCGCCTGG CATCGGCCGA TACGCGGCAG
GCGCCGTGCA TCGATCCGCG CTTCCTGTCC GATCCGACCG ACATGGCGGG CATGATGGCG
GGCTTGCGCG CCGTGCGCAG CATCTTCGCG CAGCAGCCGC TGGCCGAACT GGGCGGGCGC
GAGCTGTATT CAGAAGGGAT TCGCGGCGAC GGCTCCGACG ACGAAGCCGT GCGCGCGCTG
ATCCGCCGGC ATGCCGACAC CATCTACCAC CCGGTCGGCA CCTGCCGCAT GGGCGGCGCG
GGCGACCCCG CGGCGGTGGT CGACCCCGAG CTGCGCGTGC GCGGCATCGA GGGCCTGCGG
GTGATCGACG GCTCGGTGAT GCCGACGCTC ATCGGCGGCA ACACCAACGC GCCCGTCATC
ATGATCGCCG AGCGCGCGGC CGACCTGATC CGCCGGAGCG GCCGGCCGGT GCTCAACGTG
GTGACGCAGG CCCCGGCACC GCCCGTGCCG GCCGAGGGGC ACTAG
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| Protein sequence | MATPAAPLTF DYVIVGAGSA GCALASRLTE DPDVTVALLE AGPHDHHFSV WVPAGYAASL
PFRSRRNYAY LTTPQPGLGG RQGYQPRGRG LGGSSSLNAM IYTRGHRHDY DHWAALGCTG
WGWDSVLPYF KRSECNARVA GRDDDPLHGG NGPLHVSDLR TDNPIAQRFV EAAVAAGYRR
NDDFNGPEQE GVGLYQVTQY NGERWNAARA YLHGGDRADT TFNRGRRRLT VLPDTQALRI
VFEDRRATGV VVDRAGRTET LHARREVIVS SGTFGSPQLL MASGVGPAAQ LRALGIPVVQ
DLPGVGQNLQ DHLDVILHKK LFNLDLVGYS LRGSVRMLGE ILRYRRERRG MIATNFAEAG
GFIKSRPGLL EPDLQLHFVV AMADNHNRTF HYGHGYSCHA CVLRPESRGE VRLASADTRQ
APCIDPRFLS DPTDMAGMMA GLRAVRSIFA QQPLAELGGR ELYSEGIRGD GSDDEAVRAL
IRRHADTIYH PVGTCRMGGA GDPAAVVDPE LRVRGIEGLR VIDGSVMPTL IGGNTNAPVI
MIAERAADLI RRSGRPVLNV VTQAPAPPVP AEGH
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