| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0112 |
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| Symbol | |
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| ID | 1218915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 129215 |
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| End bp | 130354 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236469 |
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| Product | putative D-amino acid oxidase flavoprotein oxidoreductase |
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| Protein accession | NP_518233 |
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| Protein GI | 17544831 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.333695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.56231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACCC CATTTGACGT AACGATCCTC GGCGGCGGCC TCGCTGGCCG CCTGTGTGCA
TGGCAACTCG CGCAGACGGG GGTACCGCCG GCGCGCATTG CCGTGGTGGA GCGCGGCGCG
CGCGACGGCA GCGGCAGCGC CGCGTATGTC GCCGCCGCCA TGCTGGCGCC GCTGGCCGAA
GCCGCGGTGG CCGACCGCTT CGTCGTCGAA CTGGGGCTGG CGAGCCTGAC GCTGTGGCGC
GACTGGCTGC CGATGCTGCG CACGCCGGTG TTCTTCCAGC AGGCCGGCAC GCTGGTGGTG
TGGCATCCGG CGGACCGCGG CGAGGCCTCG CTGTTCGCCA ACCACGTGCG GGCCGCGACC
CCGCCCGAGC GCATCGCCGC CGATCTGCGG GCCGTGGACG CGGAAGGCAT CGGCACGCTG
GAGCCGGCGC TGGCGCAGCG CTTCTCGCAA GGGCTGTATC TGGCGGGCGA AGGCCAGCTG
GACAACCGGG CCGTGCTCGA TGCGCTGGCG ACCGAGCTGG AGGCCCTGGG CGTGCAGTTG
CGCTGGAACA CGGCGGTTGC CGATCCGCAT CCGCAAGCGC TGGCCGCCGC CGGACTCGGC
GCGCGCCTCG TGCTCGACTG CCGGGGCCTC GGCGCCCAGC CGCAATGGCC GCAGCTGCGC
GGCCTGCGCG GCGAGGTGGC GCGCATCCAT GCGCCCGATG TCACGCTCAC GCGGCCGGTG
CGCATGCTGC ATCCGCGCTA TCCGATCTAC ATCGCGCCCA AGCCGGGCCA TGTCTATGTG
ATCGGCGCCA CGGAGATCGA AAGCGACGAC ATGTCGCCCG TGAGCGTGCG CTCGACGCTG
GAGCTGCTGT CCGCCGCGTA TGCGGTGCAC CCGGCCTTTG GCGAAGCGCG CGTGCTGGAG
CTGTGCACGC AGTGCCGCCC GACACTGCCC GACCATCGCC CGGCGATCCG CTGGGATGGC
GCGGGCACGC TATCGGTCAA CGGCCTGTAC CGGCACGGCT ACATGATCGC GCCCGCCGTC
GCGCAGGCGG CCGTGGCCGC CGCGCACGCG CTGCTGGACG GCCGCGCCAT CGATGCCCCC
GCGAGCGCGT GGCCCGGACT CTTCGCCGCG CCCGCATCGC CCGAACCTGT TTTGCCATGA
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| Protein sequence | MPTPFDVTIL GGGLAGRLCA WQLAQTGVPP ARIAVVERGA RDGSGSAAYV AAAMLAPLAE
AAVADRFVVE LGLASLTLWR DWLPMLRTPV FFQQAGTLVV WHPADRGEAS LFANHVRAAT
PPERIAADLR AVDAEGIGTL EPALAQRFSQ GLYLAGEGQL DNRAVLDALA TELEALGVQL
RWNTAVADPH PQALAAAGLG ARLVLDCRGL GAQPQWPQLR GLRGEVARIH APDVTLTRPV
RMLHPRYPIY IAPKPGHVYV IGATEIESDD MSPVSVRSTL ELLSAAYAVH PAFGEARVLE
LCTQCRPTLP DHRPAIRWDG AGTLSVNGLY RHGYMIAPAV AQAAVAAAHA LLDGRAIDAP
ASAWPGLFAA PASPEPVLP
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