| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0108 |
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| Symbol | thiE1 |
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| ID | 1218911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 125843 |
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| End bp | 126994 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637236465 |
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| Product | thiamine-phosphate pyrophosphorylase protein |
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| Protein accession | NP_518229 |
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| Protein GI | 17544827 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.244017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAT CCGCCCTGCG CTTTGCCAGC GCCTGGCCGG ATGCCGCCGC GCTGGCCGAC
CGCCTCATCG ATCGCCACGC CGATGCCTTC GGCCGCGCGC CGCACGCCTG GAGCGTGACC
GACCGCGCCG ATGACGCCGC GACCGCCGCC GTCCTGCTGA CCACCGACGC CGCGCAGGCC
GAACGCGCCC GCGCCGCCGG CGCCGCCGTC GTGCTGAGCG AGGCGCGCAA CGGCGAGCGC
ATCGACACCG TGCACGACCG CCTCGGCACC TACCGCTTCG CCGCCCCGGC GACGGGCGCG
GTGTTCGGCG AACGCTTCGT CGCCATGTTC GGCGCCGCGC TGGCGCTGGC CTTCGAGCCG
CGCGACGCGC TGTGCGTGGC GCGTGCGTGG ATCGCGGAGG CCGCCGCCGA TGCGCTGGCG
TGGCCCGCCC GCTTCGACGC GCTGCCCCGC GTACTCGAAC CTGCGCTGCC GTGCGCGGCC
TCGCCGGACC TCGCCTTCGC GCCCTGCCCG CCGCGGCTCG GCGTGTATGC CGTGGTGCCG
GACGCGGAAT GGGTCGAGCG CCTCGTTGCG CTCAAGGTGC CGACCGTGCA ATTGCGCGTC
AAATCGGACG ACGCGCGGGC CGTCGCCGGG CAGGTGCGCC GCGCCGCCGC TGCCGCGCGC
GGCAGCCAGA CGCGCCTGTT CATCAACGAC CACTGGCGCG TTGCACTGGA CGTGCATGCG
CAGACGCCCG ACAGCGGCCT CTATGGCATC CACCTCGGCC AGGAAGATAT CGACGATGCG
GATCTCGCGG CCATCCGCGC GTCCGGCCTG CGCCTGGGCA TCAGCACGCA CGGCTACGCT
GAGATGCTGC GCGTCGCTGC GCTGAACCCG AGCTACCTCG CGCTGGGCGC GGTCTTCGCC
ACGCCCACCA AGACCATGCC GACCCTGCCG CAGGGTCTGG GCCGGCTGTT CGCCCATGCG
GCGGCGATGC GCTCGCGCGT GCCGGCGCCG CCGCTCGTCG CCATCGGCGG CATCGACCTG
GCTGCGATGC CGCGCGTGCT CGAGAGCGGC GTCGGCGGCG TGGCCGTGGT GCGCGCCATC
ACCCAGGCGG AGGATGTGCC CGCCGCCGTG CAGGCGCTGC AGGCGACGTT CGCGGCGCAC
GCGCGCGCCT GA
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| Protein sequence | MSASALRFAS AWPDAAALAD RLIDRHADAF GRAPHAWSVT DRADDAATAA VLLTTDAAQA
ERARAAGAAV VLSEARNGER IDTVHDRLGT YRFAAPATGA VFGERFVAMF GAALALAFEP
RDALCVARAW IAEAAADALA WPARFDALPR VLEPALPCAA SPDLAFAPCP PRLGVYAVVP
DAEWVERLVA LKVPTVQLRV KSDDARAVAG QVRRAAAAAR GSQTRLFIND HWRVALDVHA
QTPDSGLYGI HLGQEDIDDA DLAAIRASGL RLGISTHGYA EMLRVAALNP SYLALGAVFA
TPTKTMPTLP QGLGRLFAHA AAMRSRVPAP PLVAIGGIDL AAMPRVLESG VGGVAVVRAI
TQAEDVPAAV QALQATFAAH ARA
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