Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0107 |
Symbol | |
ID | 1218910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 125236 |
End bp | 125715 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236464 |
Product | hypothetical protein |
Protein accession | NP_518228 |
Protein GI | 17544826 |
COG category | [S] Function unknown |
COG ID | [COG2764] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.549372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTCA AACCCATCCC CGAGGGTTAC CACAGCGTCA CCCCGTACCT GAGCATCAAA GGCGCCGACA AGGCCCTCGA TTTCTACAAG CAGGCCTTCG GCGCCACCGA GATCATGCGC ATGGCCGGCC CGAACGGCGC CATCGCGCAC GCCGAGATCC GCATCGGCGA TTCGCCGGTC ATGATGGCCG ACGAAATGCC CAACATGAGC TGCGCCAGCC CCGACACGCT GCAGAGCACG TCGGTCGGCC TGATGATCTA TGTGAAGGAT GTCGATGCGG TCTTCGCCAA CGCCATCAAG ACGGGCGCCA CCGAAGTGCG GCCGGTGCAG AACCAGTTCT ACGGCGACCG CTCCGGCACG CTGAAAGACC CGTTCGGCCA CGTGTGGACG ATCTCGACCC ATGTGGAAGA CGTGGCGCCG GACGAGATGA AGCGGCGCAT GGACAAGTGG ACGCAGGAGC AGGCGGGCGC TACGGCCTGA
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Protein sequence | MAVKPIPEGY HSVTPYLSIK GADKALDFYK QAFGATEIMR MAGPNGAIAH AEIRIGDSPV MMADEMPNMS CASPDTLQST SVGLMIYVKD VDAVFANAIK TGATEVRPVQ NQFYGDRSGT LKDPFGHVWT ISTHVEDVAP DEMKRRMDKW TQEQAGATA
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