Gene RSc0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0107 
Symbol 
ID1218910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp125236 
End bp125715 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID637236464 
Producthypothetical protein 
Protein accessionNP_518228 
Protein GI17544826 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.549372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCA AACCCATCCC CGAGGGTTAC CACAGCGTCA CCCCGTACCT GAGCATCAAA 
GGCGCCGACA AGGCCCTCGA TTTCTACAAG CAGGCCTTCG GCGCCACCGA GATCATGCGC
ATGGCCGGCC CGAACGGCGC CATCGCGCAC GCCGAGATCC GCATCGGCGA TTCGCCGGTC
ATGATGGCCG ACGAAATGCC CAACATGAGC TGCGCCAGCC CCGACACGCT GCAGAGCACG
TCGGTCGGCC TGATGATCTA TGTGAAGGAT GTCGATGCGG TCTTCGCCAA CGCCATCAAG
ACGGGCGCCA CCGAAGTGCG GCCGGTGCAG AACCAGTTCT ACGGCGACCG CTCCGGCACG
CTGAAAGACC CGTTCGGCCA CGTGTGGACG ATCTCGACCC ATGTGGAAGA CGTGGCGCCG
GACGAGATGA AGCGGCGCAT GGACAAGTGG ACGCAGGAGC AGGCGGGCGC TACGGCCTGA
 
Protein sequence
MAVKPIPEGY HSVTPYLSIK GADKALDFYK QAFGATEIMR MAGPNGAIAH AEIRIGDSPV 
MMADEMPNMS CASPDTLQST SVGLMIYVKD VDAVFANAIK TGATEVRPVQ NQFYGDRSGT
LKDPFGHVWT ISTHVEDVAP DEMKRRMDKW TQEQAGATA