| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0101 |
|---|
| Symbol | |
|---|
| ID | 1218904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 113718 |
|---|
| End bp | 114080 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637236458 |
|---|
| Product | putative lipoprotein transmembrane |
|---|
| Protein accession | NP_518222 |
|---|
| Protein GI | 17544820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.760048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCG CCCGGATCAC GCTTTCCCGC TGCCTTGCCG GCACCGCGCT ATGCCTGCTG
GCGGGCGCCT GCGACGTCGG CTTTGTCGCC GTCATCGGCA GCACGCTGAG CATCGGCGGC
ACCGTGACCG GCCTGCCCGC CAACCAGTCG CTGGTGCTGC TCGACAATGG CCGCGATGCG
CTGACGATCA CGGCCAACGG CCCGTTCGTG TTTGCCGCGA CGGTTCCGTT CAATGGCGGC
TATACGGTGA CGATCGGCAC GCAGCCGTCG TCGGCGTCCT GCGCGGTGAG CAACGGCAGC
GGCATCGCGA CGGCCGATGT GACCAGCGTG GTCGTGACCT GCCAGCCGGT GGGCAGCGCT
TAG
|
|---|
| Protein sequence | MTSARITLSR CLAGTALCLL AGACDVGFVA VIGSTLSIGG TVTGLPANQS LVLLDNGRDA
LTITANGPFV FAATVPFNGG YTVTIGTQPS SASCAVSNGS GIATADVTSV VVTCQPVGSA
|
|---|
| |