Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0086 |
Symbol | |
ID | 1218889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 99578 |
End bp | 100267 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637236443 |
Product | hypothetical protein |
Protein accession | NP_518207 |
Protein GI | 17544805 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.851127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.63256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG TGATCGGCAA CAAGAACTAC TCGTCGTGGT CGCTGCGCCC CTGGCTGCTG GCCCGGCAGG CCGGCATTCC GTTCGAGGAG ATCCGCCTGC GCCTGGGCTC GGAGAGCTTT GCCGCGGAGG TCCGCCGTTA CTCGCCGGCC GGCCGCGTGC CGGTGCTGGT CGACGGCGAC CTCACCGTGT GGGATTCGCT GGCGATCTGC GAGACGCTGG CCGAGCGCTT TCCGCGCGCG CGCCTGTGGC CGGAAGATCC GAAGGCGCGT GCGCATGCCC GTTCGATCTG TGCCGAGATG CACACCGGCT TCACCGCCCT GCGCGGCCAG ATGCCGATGA ACGTGACCGC CGTGCTGCCG GGCATGGGCT GGAACGTCGC CGTGCAGCGC GACGTCGACC GCATCGCCCA GATCTGGACC GAGCTGCGCC AGAAATACGC CGCCGAGGGC CCGTTCCTGT TCGGCCACTT CACGGTGGCG GACGCCTTCT ATGCGCCGGT CGTCAGCCGC TTCGCCACGT ACGGCGTACG CCTGCCCGAG CTGGCCAAGG CCTATGCCGA TCACATCCTC AACCTGAGCG CGATGCAGGA ATGGATCGAG AGCGCGCGCG GCGAACACGA CTTCCTGGCC GACGATGAAC CCTACCGGAC CGCGCTGGAC GAAGACACGC TGGTCGCCGC CAACCAATGA
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Protein sequence | MKLVIGNKNY SSWSLRPWLL ARQAGIPFEE IRLRLGSESF AAEVRRYSPA GRVPVLVDGD LTVWDSLAIC ETLAERFPRA RLWPEDPKAR AHARSICAEM HTGFTALRGQ MPMNVTAVLP GMGWNVAVQR DVDRIAQIWT ELRQKYAAEG PFLFGHFTVA DAFYAPVVSR FATYGVRLPE LAKAYADHIL NLSAMQEWIE SARGEHDFLA DDEPYRTALD EDTLVAANQ
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