Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0081 |
Symbol | |
ID | 1218884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 94180 |
End bp | 95082 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637236438 |
Product | hypothetical protein |
Protein accession | NP_518202 |
Protein GI | 17544800 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0407866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTTG ACGAGCTGAT GCAGACCCTG CGCGACCGCG CAGCCGACCT GTCGCCGCAG CTGCAGCGGG CCGCGATGTT GCTGGAATCC AACCGGAGCG ACATCGCGCT GCTGTCGATG CGCGACCTGG CGCGGCGCTG TGACCTGCCG CCGGCGACCT TCTCGCGGCT GGCGCGGGCG CTGGGCTTCG AGGATTTCGC CGCGCTGCGC GAGGTGTGCG TCAGCCACCT GCGCCAGCAG GCCGAAGGCT ATGCCGGGCG CGCGACGGCG TTGCCGAGCA CCGGCTCGGA CGGGTCGGAG GCCGAGCGCA TCGGCGTGGC CGTCGGTGCG CATGTGCAGA TGGCGTTTTC GCCGGCCAAC CTGGCGGCGC TGGAGGCCGT GGCCGATGCG CTTTGCGCTG CCCGCCGCGT TTTCCTGCTC GGCGCGCGCA GCTGCCTGGC GCTGACCCAT GCGTTCGGCT ATGCCGCCCA GCTGTTCGAC GACAAGGTCA CCGTGTGCGC CGGCCATGGC AACACGCTGG CCGATCCGAT GCGCTTCTGC GGCCAGGGCG ACATTGTCGT GGCCGTGACC TTCGATCCGT ACACGCGCGA GGTGATCGAG GCGATGCAGT ATGCGCACGC ACGCGGCGCC CGCCTCGTCT ACCTGACGGA CAGCGCGCTT GCGCCCGGCG CGGAACTGGC TTGGCAGCAG CTGATCGCGC CGGTGGCCGT TCCGTCGTTC TTCCATTCGC TGGCGGCGCC GCTGGCGCTG CTCGATGCTC TGCTGATGGC CTGGTTCCGC CGCGCGGGGC CGGCCGCGCT GGCGCGCCTG GCCGACAGCG ATGCCCAGCT CAAGCAACAG CAAGCCTATG TACGCAACGC GCGCCGCAGC GAAGCGGCCA TCGCCGTGCC CGCGCAGCCC TGA
|
Protein sequence | MTFDELMQTL RDRAADLSPQ LQRAAMLLES NRSDIALLSM RDLARRCDLP PATFSRLARA LGFEDFAALR EVCVSHLRQQ AEGYAGRATA LPSTGSDGSE AERIGVAVGA HVQMAFSPAN LAALEAVADA LCAARRVFLL GARSCLALTH AFGYAAQLFD DKVTVCAGHG NTLADPMRFC GQGDIVVAVT FDPYTREVIE AMQYAHARGA RLVYLTDSAL APGAELAWQQ LIAPVAVPSF FHSLAAPLAL LDALLMAWFR RAGPAALARL ADSDAQLKQQ QAYVRNARRS EAAIAVPAQP
|
| |