Gene RSc0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0081 
Symbol 
ID1218884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp94180 
End bp95082 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content71% 
IMG OID637236438 
Producthypothetical protein 
Protein accessionNP_518202 
Protein GI17544800 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0407866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTG ACGAGCTGAT GCAGACCCTG CGCGACCGCG CAGCCGACCT GTCGCCGCAG 
CTGCAGCGGG CCGCGATGTT GCTGGAATCC AACCGGAGCG ACATCGCGCT GCTGTCGATG
CGCGACCTGG CGCGGCGCTG TGACCTGCCG CCGGCGACCT TCTCGCGGCT GGCGCGGGCG
CTGGGCTTCG AGGATTTCGC CGCGCTGCGC GAGGTGTGCG TCAGCCACCT GCGCCAGCAG
GCCGAAGGCT ATGCCGGGCG CGCGACGGCG TTGCCGAGCA CCGGCTCGGA CGGGTCGGAG
GCCGAGCGCA TCGGCGTGGC CGTCGGTGCG CATGTGCAGA TGGCGTTTTC GCCGGCCAAC
CTGGCGGCGC TGGAGGCCGT GGCCGATGCG CTTTGCGCTG CCCGCCGCGT TTTCCTGCTC
GGCGCGCGCA GCTGCCTGGC GCTGACCCAT GCGTTCGGCT ATGCCGCCCA GCTGTTCGAC
GACAAGGTCA CCGTGTGCGC CGGCCATGGC AACACGCTGG CCGATCCGAT GCGCTTCTGC
GGCCAGGGCG ACATTGTCGT GGCCGTGACC TTCGATCCGT ACACGCGCGA GGTGATCGAG
GCGATGCAGT ATGCGCACGC ACGCGGCGCC CGCCTCGTCT ACCTGACGGA CAGCGCGCTT
GCGCCCGGCG CGGAACTGGC TTGGCAGCAG CTGATCGCGC CGGTGGCCGT TCCGTCGTTC
TTCCATTCGC TGGCGGCGCC GCTGGCGCTG CTCGATGCTC TGCTGATGGC CTGGTTCCGC
CGCGCGGGGC CGGCCGCGCT GGCGCGCCTG GCCGACAGCG ATGCCCAGCT CAAGCAACAG
CAAGCCTATG TACGCAACGC GCGCCGCAGC GAAGCGGCCA TCGCCGTGCC CGCGCAGCCC
TGA
 
Protein sequence
MTFDELMQTL RDRAADLSPQ LQRAAMLLES NRSDIALLSM RDLARRCDLP PATFSRLARA 
LGFEDFAALR EVCVSHLRQQ AEGYAGRATA LPSTGSDGSE AERIGVAVGA HVQMAFSPAN
LAALEAVADA LCAARRVFLL GARSCLALTH AFGYAAQLFD DKVTVCAGHG NTLADPMRFC
GQGDIVVAVT FDPYTREVIE AMQYAHARGA RLVYLTDSAL APGAELAWQQ LIAPVAVPSF
FHSLAAPLAL LDALLMAWFR RAGPAALARL ADSDAQLKQQ QAYVRNARRS EAAIAVPAQP