| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0079 |
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| Symbol | |
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| ID | 1218882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 91044 |
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| End bp | 93431 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637236436 |
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| Product | hypothetical protein |
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| Protein accession | NP_518200 |
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| Protein GI | 17544798 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000960947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGATC GATTGCAAAG CATGAAGCTC CAAATCAACT CCACGTTGAT CCAAAACGTC
ATGTGGGCCC GGATTTGGCG GTTGCTGATC GTCGTCACCG CCGTTTGCGC TTTTGTGCCT
TGGCTGCCGG TCATGCCGCA GGCAGGTCTC GACCACTCGT GGGTGCTCGG CATGAATCAA
GCCGTCGCGC AGGGGCTGGT TTTCGGGCGC GACATGATCT TTACGTTCGG GCCGTATGCA
TCCATTTACA CAAAATCGTT CCATCCGGCC ACCGACCATC TGATGGTCGC CGGGGCATTG
TTTCTGGGCC TGATCTACGG TGCCGGGCTC GTCCTGCTGA CCCGTGAGCG CGGAGCGCTT
CCATTGGCGG GGCTATGCTT GGCGCTCGCC CTGGTTGCAG GATTGCCCCA GTCGCAGGAC
ACCCTTCTGT TTTCCTATCC CCTGATTGTC AGCCTTTACT GTTTCGGCCT GTCGGACAAG
GCAGTCTCGG ATCAAAGGGC GAGGAACAGA TCGACGATCA GCGTTGTTGT CCTGTTTCTG
CCGTTCGGGC TGCTTCCCCT GATCAAGGGG TCGCTGGTCG CCCTGTGTCT GGCGGCTACT
GTGTTCGCGG TCATTCGATT GATCAGTCTT GGGCGGCGGG AGTGGGCTAT TGCGGCGCCG
GTCGCGCAGG TGGTTGCGCT GATCGTCTTT TGGCTGGCGG CGGGACAGCC GCTTTCCGGA
TTGCCGGGCT ACTTTCAATC CATGGCCCAG ATCGTTTCCG GGTACACCGA GGCGATGGCA
TACCCGGGGG CTCCCTCGGA AATCATCCTT TATCTCATTG CCGCCGTTGT CCTGCTGGTA
TCGGTGTTGC GCGATAGCGG TGAAACCACG ATCGGGAAGA GACTCGTACT GCTTTTGCCT
TTGGTTGTTT ATTTCTTCGT CGTTTTCAAG GCCGCGTTCG TCCGTCATGA TGGGCATGCC
TTGACGGCGG GTACGTCCAT CCTGCTCGCC TCGGCCATCT TGGCTTTCCG GCTGTACAAG
CGCAGCTTGT TGTTCGTTCT GTCGGTTTCT TTGGTGACGT GGATCAGCAT TGATAGCCGC
CATCTCGCGC TCTCGGCGGC GGCCTTGCTG GATGATGCCG TATCGCCTTA TTTCTCCGCA
TGGGCCGGAG CGCAAGCCAG GCTTGCTGAC TCCCAGGCGT TGCGCCGCGA TTTCGATGCT
GCGCTTGCCA AGATCCGCGC TCAGCACGCG CTTCCGCTGC GTGAAGGCAC GGCGGACATC
TACTCCCATG AGCAGTCTGA CCTCATCGCG TCGGGAAATC GCTGGAATCC GCGGCCGGTG
CTTCAGAGCT ACTCGGCATA TACGCCCGCA CTGGCTTGGG CCAACCGGGA CCACTTGCAG
GGGCCTGCCG CGCCGGACAC CATTTTCTTC AGGGCTGAAA CCATCGATGG CCGCCTGCCC
GCTCTGGACG ATGGTCCGAG CTGGTTCGCC TTGCTGGGGC ACTATCGGCC GGAAAATCTT
CAGGGCGGTT TCCTGTCTCT GCGGAAGGAA ACTTCCGCGG GGGAGCGGAT CCGGTTTGAT
GCGGCTGGAG AGGGGCGTTT TTCGTTTGAT CAGCAGGTGA GCGTTCCTGA GGGACAGGGC
CCGGTGTTTG TTGAGATCGA CGTCGAAAAG AGCCTCGCTG GGAGGGGGAT GAACACCCTC
TACAAAGTGG ATCCGCTGGT GATCGTACTG AGTCTCGAAA ACGGCGAAAT GATGCAGTTC
AGGCTGCCTT CCGAGATGGC GCGGTCCGGC TTCATGGTGT CGCCGGTGGT GCTGAGTGCC
TCTGATTTTG GGCTCCTCTA TGCGAATGCG TATGCGCAGG GCAGCCGGGT CAAGTCTTTC
TTCATCCACG CTTTTGGCGG CGACTGGCAA TGGAAGAATA CGTACACGGT TCATTTTAAA
AGTGTGACGG TTGCGCCCCG GGCCGGGGCG CTGGCATCGC TGCATTTCAA TCAGCCAGTC
AAAGCGCCTG CCGGTACCAA TATCCATGTC GTGAATCAAT GCGAAGGCAG TATCGACACC
GTCAATGGCG TGTCACCGTC TTCCGCCGGG TTCTCGGCGC GAGGACTGCT GCAGGTGCGC
GGATGGCTCA CTGTGCAGGG AGAACAGCAG CGTCTGCCGA CAAAACCGCT ATTGGTCCTG
GGCAATGCGG AGGGTGAGCT TGCCTTCATA GAAACCCGCA GGACGATCCG GCCGGATATC
GCTGCGCACT TTGGGAGTGA TCTTCTGCAG TGGGCGGGCT ATGACGCCAT TGCGGATGTT
TCCCAGGTGA CCGGGGGGCG TGTGCTGGGT TTGGCCTTCG AGCAGAATGG CCAGATTGGA
ATCTGTCCGC AGTTCGGGGT GGCGGGCCGG TTCAGCGGTG CCGAATAA
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| Protein sequence | MSDRLQSMKL QINSTLIQNV MWARIWRLLI VVTAVCAFVP WLPVMPQAGL DHSWVLGMNQ
AVAQGLVFGR DMIFTFGPYA SIYTKSFHPA TDHLMVAGAL FLGLIYGAGL VLLTRERGAL
PLAGLCLALA LVAGLPQSQD TLLFSYPLIV SLYCFGLSDK AVSDQRARNR STISVVVLFL
PFGLLPLIKG SLVALCLAAT VFAVIRLISL GRREWAIAAP VAQVVALIVF WLAAGQPLSG
LPGYFQSMAQ IVSGYTEAMA YPGAPSEIIL YLIAAVVLLV SVLRDSGETT IGKRLVLLLP
LVVYFFVVFK AAFVRHDGHA LTAGTSILLA SAILAFRLYK RSLLFVLSVS LVTWISIDSR
HLALSAAALL DDAVSPYFSA WAGAQARLAD SQALRRDFDA ALAKIRAQHA LPLREGTADI
YSHEQSDLIA SGNRWNPRPV LQSYSAYTPA LAWANRDHLQ GPAAPDTIFF RAETIDGRLP
ALDDGPSWFA LLGHYRPENL QGGFLSLRKE TSAGERIRFD AAGEGRFSFD QQVSVPEGQG
PVFVEIDVEK SLAGRGMNTL YKVDPLVIVL SLENGEMMQF RLPSEMARSG FMVSPVVLSA
SDFGLLYANA YAQGSRVKSF FIHAFGGDWQ WKNTYTVHFK SVTVAPRAGA LASLHFNQPV
KAPAGTNIHV VNQCEGSIDT VNGVSPSSAG FSARGLLQVR GWLTVQGEQQ RLPTKPLLVL
GNAEGELAFI ETRRTIRPDI AAHFGSDLLQ WAGYDAIADV SQVTGGRVLG LAFEQNGQIG
ICPQFGVAGR FSGAE
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