| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0077 |
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| Symbol | |
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| ID | 1218879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 87475 |
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| End bp | 89910 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236433 |
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| Product | two component sensor histidine kinase transcription regulator protein |
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| Protein accession | NP_518198 |
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| Protein GI | 17544796 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000219775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCG ATCGCAGCTA CAAGCGCCTG CTGTACCAGG TGGTGGCCGG CACCATCGTC
TTCCTGGCGA TCGTGCTGGT CGGCCTGCTG GCGGCCGCCT CGGCCAATAC CGAGTTCTTC
GATCGCTACT TCACCCTGCT CTACAAGGTC AACCTCGTCA TCGGCGTGCT GCTGGTGGTG
ATCATCGGTG GGCTGATGCT GGCGCTGGCG CTGCGCGCGC GCCGCGGTAA GTTCGGCACG
CGGCTGATGA CCAAGCTGGC GGTGTTCTTC GGCGTGGTGG GTGTGCTGCC GGGCGTGCTG
ATCTACCTGG TGTCGCTGCA GTTCGTCTCG CGCAGCATCG AGTCGTGGTT CGACGTGAAG
GTGGAGTCGG CGCTCGAGGC GGGCCTGAAT CTCGGGCGCA CCACCATGGA CGCATCGCTG
GCGGAGCTGC AGAACAAGGG CCGCCTGATC GCCGAGCAGC TTGGCGATGG CTCGATGTCG
GCCACCGCCA TCACGCTGAA CCGGCTGCGC GAGCAATTCG GCGTGCAGGA GGCGACCATC
TTCACCGGCA GCGGCCGCGT GGTGGCGACG TCGTCGAACA CGTATGACAC GCTCGTGCCG
GAGTTTCCCA GCCAGGCCGT GCTGGAGCAG GCGCGCACGC CGGGCGGCTA TGCCAGCCTG
GAAGGCGGCA GCGACAGCGC GGCCGACGGC GAAGCCGCTT CGGCGCCCGC TGCGCGCGCG
GGCGGCCGCC GCAGCGATCT GTACCAGCTC CGGGTGGTGC TGGCGCTCGG AACCATGGCG
CGCGACGATG CCGCGCTCAC GCCCCATACG CCGGTGCGCA AGTGGGCTGG CTCGGGTCTG
CTGGCCGATC GCCGTTCGGA CGACAGCAGC ACGCGCGGCT TCGGCCTGAT CGGCGAGGCC
GGGCGCGAGG AGCGCTTCCT GCAGCTGGTG CAGCCGGTGC CGCAGGCGCT CGCGCGCAAC
GCCGACGCCG TGCAGCGGGC CTACCAGGAA TACCAGGAGA AGGCGCTCGG CCGCACCGGC
CTGCGCAAGA TGTACATCGG GACGCTGACG CTGACGCTGT TCCTCGCGGT GTTCATTGCG
GTGATGCTGG CGCTGCTGCT CGGCGCGCAG CTGGCGCGTC CGCTGCTGAT GCTGCTGCAG
GGCACGCGCG AGGTGGCCGA GGGCGACCTG TCGCCCAAGC GCGAGCTCCA CACGCGCGAC
GAGCTCGGCC TGCTGACCCA GCAGTTCAAC CAGATGACGC GCCAACTGGC CGATGCGCGC
CGCGCCGTGG AGCAGAATCG CGCGGCGCTC GAGCAGTCGA AGGCCTATCT CGAGAGCGTC
CTGACCAACC TGACGGCCGG CGTGTTCGTG TTCGATCACC GCTTGGTGCT GCTGACCGCC
AACCCCGGCG CCGAGCGCAT CTTCAAGCAG CCGTTTGGCG CGTGGGTCGG CCAGTCCCTG
TCCGGCATCA CGCCGCTGCA GGCGTTTGCC GGCACGCTCG AGCATGCCTT CGCCGAGCAC
GATGTGAGTG CCGCGGCCGG CGGCGCGGCG GCCCACTGGC AGAAGCAGGT GGAGATTCCG
CTGGCGGACG AGGACGAACC CCTCACCCTG CTGGTGCGCG GCACGCGGCT GCTGGGGCCG
TCGGTGGACG CGCGCGGTAC GGAGCGCGGC TACGTGGTGG TGTTCGACGA CATCTCCGAC
GTGATCTCGG CGCAGCGCTC GGTCGCCTGG GGCGAAGTGG CCCGGCGGCT CGCGCACGAG
ATCAAGAATC CGCTCACGCC GATCCAGCTC TCCGCCGAGC GCCTGGAGAT GAAGCTCTCT
CCCAAGCTGA CGGACGCCGA TGCCGAGGTG CTGCGGCGCG GCGCGACCAC CATCGTCAAC
CAGGTCGCGG CGATGAAGCG CATGGTCGAC GACTTCCGCG ACTATGCGCG CACGCCGCCG
GCCGTGCTGC AGGACCTCGA TCTGAACGCG CTGTGTACCG AGGTGCTGCA CCTGTACGGC
ATCGATCACC CGGGCCAGAG CGATCACGCC GTCATCGCGG TCAGGCTGGG CGAAGGCCTG
CCGCTCATCA AGGGCGACCC GACGCAGTTG CGGCAGGTCA TCCACAACCT GCTGCAGAAC
GCGCAGGACG CCGTCGCCGA CAACGAAGCG GCCGGGCGCC CCGCTGCGCA TGTCATGTTG
CAAACTGACA CGGTAGAATA CGACGACGCC TCGGGCGCGC GGCGGCAGGC GGTCCGGCTC
GGCATCGCGG ATAACGGGAC GGGTTTCTCA TCCCGCATCC TCAACCGTGC ATTCGAGCCG
TACGTGACGA CCAAAGCCAA GGGCACTGGA TTGGGCTTGG CCATGGTGAA GAAGATCATG
GACGAGCACG GGGCGCGCAT TGAATTGCGC AACCGCCAGT CGGGCACCGA CACCGTCGGC
GCCCAGGTTT CCATTCTGTT CGTAAAACTT GCCTAG
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| Protein sequence | MIFDRSYKRL LYQVVAGTIV FLAIVLVGLL AAASANTEFF DRYFTLLYKV NLVIGVLLVV
IIGGLMLALA LRARRGKFGT RLMTKLAVFF GVVGVLPGVL IYLVSLQFVS RSIESWFDVK
VESALEAGLN LGRTTMDASL AELQNKGRLI AEQLGDGSMS ATAITLNRLR EQFGVQEATI
FTGSGRVVAT SSNTYDTLVP EFPSQAVLEQ ARTPGGYASL EGGSDSAADG EAASAPAARA
GGRRSDLYQL RVVLALGTMA RDDAALTPHT PVRKWAGSGL LADRRSDDSS TRGFGLIGEA
GREERFLQLV QPVPQALARN ADAVQRAYQE YQEKALGRTG LRKMYIGTLT LTLFLAVFIA
VMLALLLGAQ LARPLLMLLQ GTREVAEGDL SPKRELHTRD ELGLLTQQFN QMTRQLADAR
RAVEQNRAAL EQSKAYLESV LTNLTAGVFV FDHRLVLLTA NPGAERIFKQ PFGAWVGQSL
SGITPLQAFA GTLEHAFAEH DVSAAAGGAA AHWQKQVEIP LADEDEPLTL LVRGTRLLGP
SVDARGTERG YVVVFDDISD VISAQRSVAW GEVARRLAHE IKNPLTPIQL SAERLEMKLS
PKLTDADAEV LRRGATTIVN QVAAMKRMVD DFRDYARTPP AVLQDLDLNA LCTEVLHLYG
IDHPGQSDHA VIAVRLGEGL PLIKGDPTQL RQVIHNLLQN AQDAVADNEA AGRPAAHVML
QTDTVEYDDA SGARRQAVRL GIADNGTGFS SRILNRAFEP YVTTKAKGTG LGLAMVKKIM
DEHGARIELR NRQSGTDTVG AQVSILFVKL A
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