Gene RSc0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0070 
Symboldef 
ID1218872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp80019 
End bp80528 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID637236426 
Productpeptide deformylase 
Protein accessionNP_518191 
Protein GI17544789 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTAC TGAATATCCT GCAATACCCC GATCCGCGAC TGCACAAGGT CGCCAAGCCG 
GTGGCCGTCG TGGACGACCG CATCCGCAAG CTGGTGGCCG ATATGGCCGA GACGATGTAT
GACGCGCCCG GCATCGGCCT GGCCGCCACG CAGGTCGACG TGCACGAGCG GGTGATCACG
ATCGACGTAT CGGAATCGCG CGACGAGCTG CGCGTCTTCA TCAACCCGGA GATCGTCTGG
GCGAGCGAGG CGCGCAAGGT CTGGGACGAA GGCTGCCTGT CGGTGCCCGA CATCTACGAC
AAGGTGGAGC GGCCGGACCG GGTGCGCGTG CGTGCGCTCA ACGAGAAGGG CGAATCCTTC
GAGCTGGAAA CCGACGGGCT GCTGGCGGTT TGCATCCAGC ATGAGATGGA TCACCTGATG
GGCAAGGTGT TCGTCGAGTA CCTGTCACCG CTCAAGCAGA ACCGCATCAA GATCAAGCTC
AAGAAGCACC AGCTCGAGCG CGCGCGCTGA
 
Protein sequence
MALLNILQYP DPRLHKVAKP VAVVDDRIRK LVADMAETMY DAPGIGLAAT QVDVHERVIT 
IDVSESRDEL RVFINPEIVW ASEARKVWDE GCLSVPDIYD KVERPDRVRV RALNEKGESF
ELETDGLLAV CIQHEMDHLM GKVFVEYLSP LKQNRIKIKL KKHQLERAR