| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0069 |
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| Symbol | |
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| ID | 1218871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 78593 |
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| End bp | 79765 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637236425 |
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| Product | signal peptide protein |
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| Protein accession | NP_518190 |
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| Protein GI | 17544788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCA AGCCCGCCAT GAAACCGCGC CAGTCTTACG TTTGCGCCCT CTCGGCGGTT
GCCGCGGCAG CGCTGTTCTG CGCGGGCGCC ACGCACGCCG CCGAGCGGAC TGTCTCGCCG
GCACAACAAG CGCAGGCCAC GGCGGCCGCG CAAGCCGGGA TCCCCGAATC CGCCCTCTCG
CCCAAAGCGC CCGCGCAATA CACCGTGCGC CGCGGCGACA CGCTGTGGGC CATTTCCGGC
AAGTACCTCA AGCAGCCGTG GCGCTGGCCC GAACTGTGGG GCATGAACCG CGAGCAGATC
CGCAACCCGC ACCTGATCTA TCCGGGCCAG ATCCTGTACC TGCACCATGC CAACGGCCGC
GCCTGGCTGT CGAGCTCGCC GGCTTCCGCC GAGGGCAGCA CGGTGCGCCT GTCGCCGCAT
ACGCGCGTGG CCGGCCAGGA CGGCGACGCC ATCTCCAGCA TTCCCTCTTC GGTCATCGAG
CCGTTCCTGA CCCAGCCGAT CGTGGTGGAT GAAGCAACGC TGGCCACGCC GGCACGCATC
TTCGAACTGC CGGAGGCGCG CGTCTATATG GGCAAGGGCG AAAACGCCTA CGCCCGCGGC
CTGCCCGATG GCGAAGCCGG CCAGCCCGGC ACCGTGTGGC AGGCATATCG CCCGGTCAAG
CCGCTCAAGG ATCCGGTCAC CGGCACCGTG CTCGGCTACG AGGCCGACTT CCTCGGTACC
CTGCGCGTGG TGCGCGCGGC CACCGGCCCG CAAGCCGTCT CCAAGATGGA AGTGCTGTCG
TCCAAGGAAG AGATGGGCGT CGGCACCCAC CTGATGCCGG TACCGGCGCG TGAGCCGGTG
CGCTACTCCC CGCATGCGCC GGAAGGCGAG ATCCGCGGCG CGGTCGCCAA GGTCACCGGC
GGGGTGCAGT TCGGCGGGTC CGACCAGGTG GTCGTGCTGA ACATCGGCAG CGCCAACGGG
CTGGAGCCGG GCCATGTACT GGCGCTGTCG CGCGCGGGCA AGGTGGTCAA CGACACGACC
GCGGGCAACG AGCCCGTGCA GCTGCCCGAG GAACGTTATG GCCTGGCCTT TGTGTTCCGC
GTGTTCCAGC ACGTGGCCTA TGCGCTGGTG ACGGATGCGT CGAACACAGT GGAAGTGGGC
GATGCAGCCA TCAGCCCGAC GACGCAGCCC TGA
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| Protein sequence | MLSKPAMKPR QSYVCALSAV AAAALFCAGA THAAERTVSP AQQAQATAAA QAGIPESALS
PKAPAQYTVR RGDTLWAISG KYLKQPWRWP ELWGMNREQI RNPHLIYPGQ ILYLHHANGR
AWLSSSPASA EGSTVRLSPH TRVAGQDGDA ISSIPSSVIE PFLTQPIVVD EATLATPARI
FELPEARVYM GKGENAYARG LPDGEAGQPG TVWQAYRPVK PLKDPVTGTV LGYEADFLGT
LRVVRAATGP QAVSKMEVLS SKEEMGVGTH LMPVPAREPV RYSPHAPEGE IRGAVAKVTG
GVQFGGSDQV VVLNIGSANG LEPGHVLALS RAGKVVNDTT AGNEPVQLPE ERYGLAFVFR
VFQHVAYALV TDASNTVEVG DAAISPTTQP
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