| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0066 |
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| Symbol | topB |
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| ID | 1218868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 74076 |
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| End bp | 76709 |
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| Gene Length | 2634 bp |
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| Protein Length | 877 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637236422 |
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| Product | DNA topoisomerase III |
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| Protein accession | NP_518187 |
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| Protein GI | 17544785 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGG CTCTGATCAT TGCCGAAAAA CCGTCGGTCG CCGCTGATAT TGCGCGCGCG
CTGGGTGGCT TCACCAAGCA CGACGAGTAC TACGAAAGCG ACGACCACGT CCTTTCGTCG
GCGGTCGGCC ACCTGGTCGA AATCGCGGCC CCCGATGAAT ACGAAGTCAA GCGTGGCAAA
TGGAGCTTCG CGCACCTGCC GGTGATCCCG CCGCACTTCG ACCTGCGCCC GATCGCCAAA
TCGGAATCGC GGCTGAAGGT TCTGACCCGG CTGATCAAGC GCAAGGACGT CACCAGCCTC
ATCAACGCCT GCGACGCGGG GCGCGAGGGC GAACTGATCT TCCGCCTGAT CGCGCAGCAC
GCCAACACCA AGCTGCCGAT CCAGCGGCTG TGGCTGCAAT CGATGACGCC GCAGGCCATC
CGCGACGGCT TTGCCCAGTT GCGCAGCGAC AACGAGATGC TGCCGCTGGC CGACGCCGCC
CGCTGCCGCT CCGAGGCCGA CTGGCTGGTC GGCATCAACG GCACGCGCGC CATGACCGCC
TTCAACAGCA AGGGCGGCGG CTTCTTCCTG ACCACCGTGG GCCGCGTGCA GACGCCGACG
CTGTCGATCG TGGTCGAGCG CGAGGAGAAG ATCAAGCGCT TCGTCCCGCG CGACTACTGG
GAAGTGCGCG CCGAGTTCAT CGCCGCGGCC GGCCTGTACG AGGGCCGCTG GTTCGACCCG
AAGTTCAAGA AGAGCGAGTT CGACCCCGAG CAGCGCGAAT CGCGGCTGTG GAGCGAGGCC
GAAGCCCTGA GTATTGTCGC CGCATGCCGC GACAAGCCGG GCATGGTCAC CGAAGAATCG
AAGCCGTCGA CGCAGATGTC GCCGGCGCTC TTCGACCTGA CCAGCCTGCA GCGCGAGGCC
AACAGCCGCT TCGGCTTCTC GGCCAAGAAC ACGCTGGGCC TGGCACAGGC ACTGTATGAA
AAGCACAAGG TCCTGACCTA CCCGCGGACG GATTCGCGCG CGCTGCCCGA AGACTACCTG
GGCACGGTGC GCCAGACGCT GGACATGCTG GCCGACAGCT CGCACAACTA CCTGCCGCAC
GCGAAGAAGA TCCTCGCCAG CCAGTGGGTC AAGCCCAACA AGCGGATCTT CGACAACAGC
AAGATCAGCG ATCACTTCGC CATCATCCCC ACGCTGCAGG CGCCGAAGAA CCTGTCGGAG
CCCGAGCAGA AGCTGTACGA CCTGGTGGTG CGCCGCTTCC TCGCGGTGTT CTTCCCGGCG
GCCGAGTACC TGGTCACCAC GCGCGTGACC GAGGTGGCGG GCCATCACTT CAAGACCGAA
GGCAAGGTCC TCGTGAACCC GGGCTGGCTG GTAGTCTACG GCCGCGAATC GCAAAGCAAA
GACGACAAGG AAAACGGCAA CCTGGTGCCG GTGGCCAAGG CCGAGAAGGT CAAGACCGAC
AAGGTCGAGC CGGTCAGCCT GACCACCAAG CCGCCCGCGC GCTACAACGA AGCGACGCTG
CTGTCGGCCA TGGAAGGCGC CGGCAAGCTG GTCGATGACG ACGCGCTGCG CGAGGCCATG
GCCGGCAAGG GCCTGGGCAC GCCGGCCACG CGCGCCGCCA TCATCGAAGG GCTGCTGACC
GAGAAATACC TGCTGCGCGA AGGCCGCGAG CTGATCCCCA CCGCCAAGGC GTTCCAGTTG
ATGACGCTGT TGCGCGGCCT GGGCGTGGAA GAACTGACGC AGGCCGAGCT GACCGGCGAG
TGGGAGCACA AGCTCGCCCA GATCGAGCGC GGCCGCCTGG CGCGCGACGA ATTCATGCGC
GAGATCGCGC AGATGACGCA GCAGATCGTC AAGCGCGCCA AGGAATACGA TAGCGACACC
ATCCCCGGCG ACTACGCGAC GCTGTCCACG CCATGCCCGC AGTGCGGCCA CGTGGTCAAG
GAGAACTACC GCCGCTTCGC CTGCAGCCAC TGCGATTTCT CGATCAGCAA GATCCCGGGC
GGGCGCCAGT TCGAGCTGGA AGAAGTCGAG GAGCTGCTGA TCAACAAGAC CATCGGTCCG
TTGCAGGGCT TCCGCAGCAA GATGGGCCGG CCGTTCGCGG CCATCCTCAA GCTGGCGCAG
GAAGACGGCC ACTGGAAGAT GGAGTTCGAC TTCGGTCAGA ACGATGGCGA CGAAGACGGC
GAGCCGGTCG ATTTCAGCGG CCAGGAAAGC GTCGGACATT GCCCCAAGTG CAGCGGCAAT
GTCTACGAGC ACGGCCTGAA GTATGTGTGC GAGAACGCGG TCGCCCAGCC CAAGACGTGC
GACTTCACCA CCGGCAAGAT CATCCTGCAG CAGGAGATCA GCCGCGAGCA GTTGCACAAG
CTGCTCGCCG AGGGCAAGAC CGACCTGCTG ACCGGCTTCA AGTCGGCGCG CACGGGCCGG
GTCTTCAAGG CGTTCCTGGT CAAGCAGCCG GACGGCAAGA TCGGCTTCGA GTTCGAGCCG
CGCGGCGAGG GCAAGGCCGC CGCCAAGAAG ACCACGACTG CAGCCAAGAA AACCGCGGCA
GCCAAGGCAC CGGCCAAGAC TGCCGCCAAG AAGACCACGG CAGCGGCCAA GAAGACCCCT
GCGCGCAAGA AGGCGGCCAC CGAGGCCGAC GAGGAAAGCA CCAGCGAAAC CTGA
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| Protein sequence | MSKALIIAEK PSVAADIARA LGGFTKHDEY YESDDHVLSS AVGHLVEIAA PDEYEVKRGK
WSFAHLPVIP PHFDLRPIAK SESRLKVLTR LIKRKDVTSL INACDAGREG ELIFRLIAQH
ANTKLPIQRL WLQSMTPQAI RDGFAQLRSD NEMLPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IKRFVPRDYW EVRAEFIAAA GLYEGRWFDP
KFKKSEFDPE QRESRLWSEA EALSIVAACR DKPGMVTEES KPSTQMSPAL FDLTSLQREA
NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DSRALPEDYL GTVRQTLDML ADSSHNYLPH
AKKILASQWV KPNKRIFDNS KISDHFAIIP TLQAPKNLSE PEQKLYDLVV RRFLAVFFPA
AEYLVTTRVT EVAGHHFKTE GKVLVNPGWL VVYGRESQSK DDKENGNLVP VAKAEKVKTD
KVEPVSLTTK PPARYNEATL LSAMEGAGKL VDDDALREAM AGKGLGTPAT RAAIIEGLLT
EKYLLREGRE LIPTAKAFQL MTLLRGLGVE ELTQAELTGE WEHKLAQIER GRLARDEFMR
EIAQMTQQIV KRAKEYDSDT IPGDYATLST PCPQCGHVVK ENYRRFACSH CDFSISKIPG
GRQFELEEVE ELLINKTIGP LQGFRSKMGR PFAAILKLAQ EDGHWKMEFD FGQNDGDEDG
EPVDFSGQES VGHCPKCSGN VYEHGLKYVC ENAVAQPKTC DFTTGKIILQ QEISREQLHK
LLAEGKTDLL TGFKSARTGR VFKAFLVKQP DGKIGFEFEP RGEGKAAAKK TTTAAKKTAA
AKAPAKTAAK KTTAAAKKTP ARKKAATEAD EESTSET
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