Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0065 |
Symbol | |
ID | 1218867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 73037 |
End bp | 73975 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236421 |
Product | transcription regulator protein |
Protein accession | NP_518186 |
Protein GI | 17544784 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCT TGCAGTCGAT GCGCGTGTTC TCCAAGGTGG TGGAGCTCGG CAGCTTTGCC CGGGCTGCGC AGCATCTGTC GATGTCCAAT GCCGTGGTCA CCCGCTACGT GGCCGACCTG GAGGCCCATC TCGGCACGCG CCTGCTCAAC CGCACCACGC GCAGCCTGTC GTTGACGGAC GTGGGCGAGA CCTATCTGCA GCGCTGTCAG CAGATCCTGC TGGACATCGA TGAAGCCGAA TCGCTTGCCA CATCGCGCAG CCAGGCGCTG GTCGGCAGCC TGCGCATCGT CGCGCCGGTC ATGTTCGGGC TGCACGTGCT GCCGATGCTG CTGGCGCGCT TCCAGCAGCT CTATCCTGAG GTGACCTTCG ACGTGGCACT GTCGGACCGT CCGATCGATA TCGTCGAGGA TGGGCGCGAC GTCGGCATCA TGGTGTCGGA ACTCGGCCTG GGCTCGCACC TCGTGGCGCG CCGGATGATC TCTGCCGAGA TGGTCATGGC GGCCACCCCC GCCTACCTGC GCCAGCACTC CACGCCGCAG CGCGCCGAAG ACATCGCCGA CCACCGCGTG ATCGCCATGT GGCATCCGCA ACTGCGGCAC GAGTGGGAGA TGACTGCGCC GGACGGCCAG TCGATCGCGG TGCCGGTGCA GCCGTCGCTG GTGACCAGCA ACGCCGAGCT GATGCACCGC GCGGTGCTGG CCGACATGGG GATCGCCATC CTGTCGTCTT ACATGGCGCG GCCGGATCTG GAGTCGGGGC GGCTGGTGCG CGTGCTGCCG CAGTACAAGC TGCCGCACCG ATCGCTATCG CTGGTCTACC CGAGCCGCAA GTTCCTGCCG ACCAAGGTGC GCACCTTCAT CGACTACATG TTGGCCCAGG CGATGGAGGC CAAGCAGAGC GAGGCCCGCG CCGGCCGCGC GCTGACCGAG GCCGCATAA
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Protein sequence | MDRLQSMRVF SKVVELGSFA RAAQHLSMSN AVVTRYVADL EAHLGTRLLN RTTRSLSLTD VGETYLQRCQ QILLDIDEAE SLATSRSQAL VGSLRIVAPV MFGLHVLPML LARFQQLYPE VTFDVALSDR PIDIVEDGRD VGIMVSELGL GSHLVARRMI SAEMVMAATP AYLRQHSTPQ RAEDIADHRV IAMWHPQLRH EWEMTAPDGQ SIAVPVQPSL VTSNAELMHR AVLADMGIAI LSSYMARPDL ESGRLVRVLP QYKLPHRSLS LVYPSRKFLP TKVRTFIDYM LAQAMEAKQS EARAGRALTE AA
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