| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0064 |
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| Symbol | |
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| ID | 1218866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 70887 |
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| End bp | 72692 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236420 |
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| Product | putative long-chain-fatty-acid--CoA ligase protein |
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| Protein accession | NP_518185 |
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| Protein GI | 17544783 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.846144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGATG GATACCATCG AAGCCCACCG TCACGAGCGC CCCGTATCGA GGGCTGCCAG
CACACAGCCG GCGCGTCGCC CAGCGGCGAC ACCGGACCGA GGAGACACGC CATGACCGCC
CATAACCGCG AACCGGTCGA GTATCTCGCG GGCGAGATGC CGCTGCACCG CTATTGCGCG
CATCACGCCG CGCAGACCCC CGAGCGTATC GCCCTGCTGT GGTACGGCCG TACGATCTGC
TGGCGCGAGC TCGATCAGCT GTCGACGCGG CTGGCCGTGC AGTTCCAGCG GCTCGGCGTG
GCGCGTGGGC ATCGTGTCGC CCTGTTCCTG CAGAACTGTC CGCAGGCCAT CCTGGCGCAT
CTGGCCGCCG CCAAGCTGGG CGCCATCGCG GTGCCATGCC TGCCGCTGTC GCGCCAGCAT
GAACTGCACG ACCAGTTGGC CGATTGCGGC GCCAAGGTCC TGGTTGCCGC GGCCGACCTG
ATGCCCATCG TCGAAGCCGC GCGGCCGGGC ACCTCGGTCG ACGCCGTCAT CACCACGCGC
TATGCCGACC TGCAGCCGGC GCAGCCCGCC TGCCGCAAGG CGCTGGCGGT GCCGCCCGAG
CTGATCGCCG CCGATATCGC GTCCGCCCCG GTGGGCCGGG GCCAAGCCGG CAGCAGCGGT
CAGTTCGACC TCATGCGGCT GCTGGGCGAG CCGGTGGACG TGGCCGAGCG CAATGCCGTC
ACCGCGATCC AGGTCGACCT GGACGAGGTG GCGCTGATGG TCTACACGTC CGGCATCACC
GGGCGCCCCA AGGGGGCCAT GCTCACCCAC CGCAACGCGC TGTACAAGAC CGCCGTGACC
GTGCAGACGA GCGGCATCCA GGCCGCCGAC GTACTGCTGG CGGCGGCGCC GCTGTCGCAC
ATCGCCGGCA TGCTGATGGG CATGAACCTG ATGCTGTACG CGGGCGCGCC GACCATCCTG
CTGTATCGCT TCGACCCGCT GGCCGTGCTG CAGGCGATCG ACCGCTATCG CGTCACCTGG
TGGTACAGCA TGACGCCGAT GAATCTGGCG GTGATGGCGC ATCCCGAAGC CGGGCAGTAC
CGCATGGCCT CGCTGATCGG CAACCCGTGT ACCAGTTTCG GCGCGCCGCT GACCGAGGCG
ATCGCCGATC GATGGCGCGC CTTCGCGGGG CCGCAATGCC GCATCTATGA AGCGGCCTAC
GGCCTATCGG AAACGCATAC CTGCGACGCC GTCATGCCGC CCGATGCCCC CCGCTGGGGC
TGGCACGGCA AGATCGTGCC GCAGACCGAG GTTCGCATCG TCGATCCGCA CACCGGCGCC
GAACTGCCGC CGGGCCGGTC GGGCGAAATC ACGATCCGCA GCCCGGGCGT GTTCCGCGGC
TACTGGCGGC GAGACGAGGC AACGCGGGCC GCGATGCAGG ACGGCTTCCT GCGCACCGGC
GACATCGGCC AGGTCTCGCC CGACGGCTAC CTGCAATGGC AGGGCCGCCT CAAGGAACTG
ATGAAGGTGT CGGGCTACAG CGTGTTCCCG GAAGATGTGG AGGCGCTGCT GTCGCGCCAC
CCGGCCATCC GGCAGGTGGC CGTGACACCG ATGCCGGACC CGGACAAGGG CGAGGTGGTC
TGCGCCCACA TCGTGCGCAT GAGCGGCATG GCGCTCACCG AAGCCGAGCT GATCGCCTGG
TCGCGCGAGA ACATGGCGCC GTACAAGGTG CCGCGCCGGG TGAGGTTCCA CGACGCGCTG
CCGGCCACGG CCACCGGCAA GGTGCTGCGG CGACTGTTGC GGGAAGAGGC GGCGGTGGCG
GCCTGA
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| Protein sequence | MSDGYHRSPP SRAPRIEGCQ HTAGASPSGD TGPRRHAMTA HNREPVEYLA GEMPLHRYCA
HHAAQTPERI ALLWYGRTIC WRELDQLSTR LAVQFQRLGV ARGHRVALFL QNCPQAILAH
LAAAKLGAIA VPCLPLSRQH ELHDQLADCG AKVLVAAADL MPIVEAARPG TSVDAVITTR
YADLQPAQPA CRKALAVPPE LIAADIASAP VGRGQAGSSG QFDLMRLLGE PVDVAERNAV
TAIQVDLDEV ALMVYTSGIT GRPKGAMLTH RNALYKTAVT VQTSGIQAAD VLLAAAPLSH
IAGMLMGMNL MLYAGAPTIL LYRFDPLAVL QAIDRYRVTW WYSMTPMNLA VMAHPEAGQY
RMASLIGNPC TSFGAPLTEA IADRWRAFAG PQCRIYEAAY GLSETHTCDA VMPPDAPRWG
WHGKIVPQTE VRIVDPHTGA ELPPGRSGEI TIRSPGVFRG YWRRDEATRA AMQDGFLRTG
DIGQVSPDGY LQWQGRLKEL MKVSGYSVFP EDVEALLSRH PAIRQVAVTP MPDPDKGEVV
CAHIVRMSGM ALTEAELIAW SRENMAPYKV PRRVRFHDAL PATATGKVLR RLLREEAAVA
A
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