| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0028 |
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| Symbol | gabD1 |
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| ID | 1218830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 32580 |
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| End bp | 34073 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236384 |
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| Product | succinate-semialdehyde dehydrogenase oxidoreductase protein |
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| Protein accession | NP_518149 |
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| Protein GI | 17544747 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCGATCTGCC ACCGGCACCG ATCACGCTCA ACGACCCGGC GCTGTGGCGC
ACGCAAGCCT TCCTGGCCGG CGCGTGGACC GATGCCGATG ACGGCAGCAC CCGCGACGTG
ACCGACCCCG CCACCGGCCG CGTGATCGGC ACGGTGCCCG CGATGGGCGC CGCGGAGACG
CGCCGCGCCA TCGAGGCCGC GCAGGCCGCG CAGCGCGCCT GGCGCAAGGT GACCGCGCGC
GAGCGCGCCC GGATCCTGCG CAAGCTGGCC GACCTGATGC TGGAGCACCA GCAGGACCTG
GCCCGCATCC TGACCGCCGA GCAGGGCAAG CCGCTGCCCG AGGCCACGGG CGAGATCGCC
TATGCCGCCT CGTTCATCGA GTGGTTTGCC GAAGAGGCCC GCCGCGTCTA CGGCGACACC
ATCCCCGCGC CGCAGGGCGA CCGCCGGATC GTCGTCAACA AGGAACCGAT CGGGGTGACG
GCGGCGATCA CGCCGTGGAA CTTCCCCATC GCGATGATGA CGCGCAAGGT CGGCCCGGCG
CTGGCGGCCG GCTGCGCGAT GGTGGTCAAG CCCGCGCTGG AGACACCTTA CTCCGCGCTG
GCCTTCGCGG AACTGGCCGC GCGCGCGGGC GTGCCGGCGG GGCTGCTGTC CATCGTCACC
GGCGACGCGC AGGGCATCGG CGGCGAGCTG ACCGCCAACC CCGTCGTGCG CAAGCTGAGC
TTCACCGGCT CCACGGCCGT CGGCCGCCTG CTGATGCGCC AGTGCGCCGA CGACGTGAAG
AAGCTGTCGC TGGAGCTGGG CGGCAACGCG CCCTTCATCG TGTTCGACGA TGCCGATCTC
GATGCCGCCG TGGAAGGCGC GATGGTGGCC AAATACCGCA ACGCCGGCCA GACCTGCGTG
TGCGCCAACC GCTTCTACGT GCAGCGCGGC ATCTATGACG CCTTCGCCGC CAGGCTGAGC
GAGGCCGTGC GCGCGCTGCG CGTGGGCAAC GGTGCCGAGC CGGGCGTGCA GCAGGGCCCG
CTGATCCACC AGCGCGCGAT GGACAAGGTG CGCGCCCACG TGGACAACGC CGTCGCGCAG
GGCGCCCGCG TGCTCGTCGG CGGCAAGCCG CATGCGCTGT CGGCCCAGGG CGGGGCCTTC
TTCGAGCCGA CCGTCATCGT GGATGCCCGG CCCGGCATGC TGGTCGCGCA CGAGGAGACC
TTCGGCCCGC TGGCCGCGCT GATCCCGTTC GACACCGAAG ACGAAGCCGT GGCCGCCGCC
AACGACACCG AGTTCGGCCT GGCCGCGTAT TTCTACACGC GCGACCTGGG CCGCGCGTGG
CGCGTGTCGG AAGCGCTGGA GAGCGGCATG GTCGGCGTCA ACACCGGATT GATCTCGACG
GCCGAGGCGC CGTTCGGCGG CGTCAAGCAA TCGGGCCTGG GCCGCGAAGG CTCCAAGTAC
GGCATCGACG AGTACCTGGA GATCAAGTAC GTCTGCATGG CCGGGCTCGG CTGA
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| Protein sequence | MTRTDLPPAP ITLNDPALWR TQAFLAGAWT DADDGSTRDV TDPATGRVIG TVPAMGAAET
RRAIEAAQAA QRAWRKVTAR ERARILRKLA DLMLEHQQDL ARILTAEQGK PLPEATGEIA
YAASFIEWFA EEARRVYGDT IPAPQGDRRI VVNKEPIGVT AAITPWNFPI AMMTRKVGPA
LAAGCAMVVK PALETPYSAL AFAELAARAG VPAGLLSIVT GDAQGIGGEL TANPVVRKLS
FTGSTAVGRL LMRQCADDVK KLSLELGGNA PFIVFDDADL DAAVEGAMVA KYRNAGQTCV
CANRFYVQRG IYDAFAARLS EAVRALRVGN GAEPGVQQGP LIHQRAMDKV RAHVDNAVAQ
GARVLVGGKP HALSAQGGAF FEPTVIVDAR PGMLVAHEET FGPLAALIPF DTEDEAVAAA
NDTEFGLAAY FYTRDLGRAW RVSEALESGM VGVNTGLIST AEAPFGGVKQ SGLGREGSKY
GIDEYLEIKY VCMAGLG
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