Gene RSc0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0027 
SymbolmetX 
ID1218829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp31089 
End bp32300 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID637236383 
Producthomoserine O-acetyltransferase 
Protein accessionNP_518148 
Protein GI17544746 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC TCCAGGTGGA TCCCGCCGCT TCCGCAGATC CGGCGGCCGC TGCCGACACA 
CCCCGGCATC CCGCCGCCAC GCTGCCGCCC GACTCGGTCG GGCTGGTGGT ACCCGAGCGC
ATGCACTTCG CCGAGCCGCT GCCGCTGCGC AACGGCTCGC AGCTCGTCGG CTACGACCTG
ATGGTCGAGA CCTACGGCAC GCTCAATGCC GAGCGCTCCA ACGCCGTGCT CATCTGCCAC
GCGCTCAACG CCTCGCACCA CGTGGCGGGC GTGCATGCCG AGGGCGAGGT CGGCTGGTGG
GACAACATGG TCGGGCCGGG CAAGCCGGTC GACACCAACC GCTTCTTCGT CATCGGCGTC
AACAACCTCG GCTCGTGCTT CGGCTCGACC GGCCCGATGA GCCCGCATCC GCAAACCGGC
CAGCCCTACG GCGCGCGCTT CCCGGTGGTC ACGGTGGAAG ACTGGGTCAA CGCCCAGGCG
CGCGTGGCCG ACCGCTTCGG CATCCGCCAG TTCGCGGCGG TAATGGGCGG CAGCCTCGGC
GGCATGCAGG CCCTGGCGTG GAGCCTGATG TACCCGGAGC GCGTGCGGCA CTGCGTGGTG
GTGGCGTCGA CGCCGAAGCT CTCGGCGCAG AACATCGCGT TCAACGAAGT GGCGCGCAGC
GCGATCCTGT CCGACCCTGA TTTCCACGGC GGCGACTACT ACGCGCACAA CGTCAAACCC
AAGCGCGGCC TGCGCGTGGC GCGCATGATC GGCCACATCA CCTACCTGTC GGACGAGGAC
ATGGCCGAGA AATTCGGCCG CGAGCTCAAG GCCGAAGACA TCCGCTTCTC GTTCGACGTC
GAGTTCCAGG TGGAAAGCTA CCTGCGCTAC CAGGGCGACA AGTTCGCCGA ATACTTCGAC
GCCAACACCT ACCTGCTGAT CACGCGCGCG CTCGACTACT TCGACCCGGC ACTGGCCTAT
GAGGGCAGCC TGACCCGCGC CGTGGCGCAC ACGCGGGCCA GCTACCTCGT CGTCAGCTTC
ACCACCGACT GGCGCTTCGC CCCCGCGCGC AGCCGCGAAC TGGTCAAGGC GCTGCTCGAC
AACAAGCGCC CCGTCACCTA CGGCGAGATC GACGCGCCGC ACGGCCACGA CGCCTTCCTG
CTGGAAGACG CGCGCTACCA CGCGCTGGTG CGCGCCTATT ACGAACGCAT CGCCCAGGAG
ATCGGCGCAT GA
 
Protein sequence
MTELQVDPAA SADPAAAADT PRHPAATLPP DSVGLVVPER MHFAEPLPLR NGSQLVGYDL 
MVETYGTLNA ERSNAVLICH ALNASHHVAG VHAEGEVGWW DNMVGPGKPV DTNRFFVIGV
NNLGSCFGST GPMSPHPQTG QPYGARFPVV TVEDWVNAQA RVADRFGIRQ FAAVMGGSLG
GMQALAWSLM YPERVRHCVV VASTPKLSAQ NIAFNEVARS AILSDPDFHG GDYYAHNVKP
KRGLRVARMI GHITYLSDED MAEKFGRELK AEDIRFSFDV EFQVESYLRY QGDKFAEYFD
ANTYLLITRA LDYFDPALAY EGSLTRAVAH TRASYLVVSF TTDWRFAPAR SRELVKALLD
NKRPVTYGEI DAPHGHDAFL LEDARYHALV RAYYERIAQE IGA