| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0022 |
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| Symbol | cstA |
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| ID | 1218824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 26383 |
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| End bp | 28443 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236378 |
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| Product | carbon starvation A transmembrane protein |
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| Protein accession | NP_518143 |
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| Protein GI | 17544741 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0699392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG TCAGGCAACA CCTGATCTGG CTGGTTGTCG CCATTCTTGG CGCGTTTGCC
TTTTCCACCG TCGCGCTTGC GCGCGGGGAG GCGGTCAGCG CGCTGTGGGT GGTGGTGGCC
GCCGTATGCA TCTACCTGAT CGCATACCGT TACTACAGCC GCTACATCGC CGACAAGGTG
CTCGGCCTGG ACGGCACCCG CAAGACGCCG GCCTGGCGTC ACAACGACGG GCTCGATTAC
GTTCCCACCA ACAAGTACGT GCTGTTCGGC CACCACTTCG CGGCCATCGC CGGCGCCGGC
CCGCTGGTCG GCCCCGTGCT CGCCGCGCAG ATGGGCTACC TGCCTGGCAT GCTGTGGATC
CTGGCCGGCG TCGTGTTCGC CGGCGCGGTG CAGGACTTCA TCGTGCTGTT CATCTCCAGC
CGCCGCGACG GCCGCTCGCT GGGCGACCTG GTGAAATCGG AAATGGGCAC GGTGCCCGGC
CTGATCGCGC TGTTCGGGGC GTTCCTCATC ATGATCATCA TCCTCGCCGT GCTGGCGCTG
ATCGTGGTGA AGGCGCTGGC CGGTTCGCCG TGGGGCACCT TCACGGTGGC GGCGACGATC
CCGGTCGCCA TCTTCATGGG CCTGTATGTG CGCTTCATCC GCCCGGGCCG GGTCGGCGAG
GTGTCCATCA TCGGCTTCGT GCTGCTGATG CTCGCCATCA TCGGCGGGCA GGCCGTGCAC
GAGAGCGCCA CGCTGGCGCC GCTGTTCACA TACGACGGCA AGGCGCTGAC CTGGATGCTG
ATCGGCTACG GCTTCGTCGC CTCGGTGCTG CCGGTGTGGC TGCTGCTGGC GCCGCGTGAC
TATCTGTCGA CCTTCCTGAA GATCGGCACC ATCATGGCGC TGGCGATCGG CATCCTGATC
GTCGCGCCGC AGATGCAGAT GCCGTCGCTG ACGCAGTTCG CGGCGGGCAA CGGTCCGGTG
TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACCATCG CGTGCGGCGC GGTGTCGGGC
TTCCACTCGC TGATCTCGTC GGGCACCACG CCCAAGATGC TGGAGAACGA ACTCCAAGCG
CGCTTCATCG GCTACGGCGC GATGCTGATG GAATCGTTCG TCGCCATCAT GGCGCTGGTG
GCCGCCTCGG TCATCAACCC GGGCGTGTAC TTTGCGATGA ACGCGCCGGC CGCGCTGGTG
GGCACCACCG CCGACGCGGT GGCGCAGACG CTGTCGACAT GGGGCTTCGT CGTCACGCCG
GACGTGCTGC TGCAGACCGC CAAGGACGTC GGCGAGAACA CCATTCTGGC CCGTGCGGGC
GGCGCGCCGA CGTTGGCGGT CGGCATGGCG CACATCCTGC ACCAGGTGGT GGGCGGCCAG
GCCATGATGG CGTTCTGGTA CCACTTCGCC ATCCTGTTCG AGGCGCTGTT CATCCTGACC
GCCGTGGACG CGGGCACGCG TGCCGGCCGC TTCATGCTGC AGGATCTGCT GGGCACCTTC
GTGCCGGCCC TCAAGCGCAC CGAGTCGCTG ACGGCCAACC TGATCGCCAC GGCGGCGACC
GTCGCGCTGT GGGGCTACTT CCTGTACCAG GGCGTGGTCG ATCCGCTGGG CGGCATCAAT
ACGCTTTGGC CGCTGTTCGG CATCTCCAAC CAGATGCTGG CGGCGATCGC GCTGACGCTG
GGCACCTGCG TGCTGATCAA GATGAAGCGC GACCGCTACG TCTGGGTGAC GCTGCTGCCG
ACCGCGTGGC TGCTGGTCTG CACGCTGACG GCCGGCTGGC AGAAGCTGTT CCACCCGGAT
CCGAAGATCG GCTTCCTGTC GCACGCCAAC AAGTTCGCCG ACGCCATTGC CGCCGGCAAG
CTGCTGGCTC CGGCCAAGTC GATGGCGCAG ATGCAGCAGA TCGTGCTGAA CGATCGCATC
GATGCCTTCC TGTGCGGCCT GTTCGTGCTG GTGGTCGTCA GCATTGCCTG GTACGGCTTG
CGCACCGTGC TGAAGGCGCG CACCCAGGCT CGCCCGACGG TCAACGAAAC GCCGTACGAA
GCGCTGGGCG CCACGCACTG A
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| Protein sequence | MSFVRQHLIW LVVAILGAFA FSTVALARGE AVSALWVVVA AVCIYLIAYR YYSRYIADKV
LGLDGTRKTP AWRHNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYLPGMLWI
LAGVVFAGAV QDFIVLFISS RRDGRSLGDL VKSEMGTVPG LIALFGAFLI MIIILAVLAL
IVVKALAGSP WGTFTVAATI PVAIFMGLYV RFIRPGRVGE VSIIGFVLLM LAIIGGQAVH
ESATLAPLFT YDGKALTWML IGYGFVASVL PVWLLLAPRD YLSTFLKIGT IMALAIGILI
VAPQMQMPSL TQFAAGNGPV WSGNLFPFLF ITIACGAVSG FHSLISSGTT PKMLENELQA
RFIGYGAMLM ESFVAIMALV AASVINPGVY FAMNAPAALV GTTADAVAQT LSTWGFVVTP
DVLLQTAKDV GENTILARAG GAPTLAVGMA HILHQVVGGQ AMMAFWYHFA ILFEALFILT
AVDAGTRAGR FMLQDLLGTF VPALKRTESL TANLIATAAT VALWGYFLYQ GVVDPLGGIN
TLWPLFGISN QMLAAIALTL GTCVLIKMKR DRYVWVTLLP TAWLLVCTLT AGWQKLFHPD
PKIGFLSHAN KFADAIAAGK LLAPAKSMAQ MQQIVLNDRI DAFLCGLFVL VVVSIAWYGL
RTVLKARTQA RPTVNETPYE ALGATH
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