| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0021 |
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| Symbol | |
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| ID | 1218823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 24619 |
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| End bp | 26082 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236377 |
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| Product | transmembrane sensor histidine kinase transcription regulator protein |
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| Protein accession | NP_518142 |
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| Protein GI | 17544740 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.130425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC GCCAAAAGAT CCTGCTGCTC GCCGTCGCGC CGCTGACCAT CGCCATGCTG
GCGATCATGC TGACCGTGCG GCACCAGTCG ATCGCCCTGG CGCAGCACGA GCGGCAACTG
GTGGAATCGG CCTACCTGCA GGCCAAGGAG GCCGAGCTGC GCGCCCACGT GAAGCTGGCG
CGCAGCGCGA TCGCGCCGCT GCTGGCCTCC GGCCGCAGCG ACCAGGCCAC CCGCGACGAA
GCCATGCGGA CGCTGGCCCG CCTGGATTTC GGGCCGGACG GCTACTTCTT CCTCTATGAC
CTGCGCGGCC GCAACCTGAT GCATCCGCGC CAGCCCGAAC TGGTCGGCCG CGACCTGTGG
CGCCTGACCG ACGCGCGCGG CCAGCCCACC ATCCAGAGAC TGGTGGCCGC CGCGCAGGCC
GGCGGCGGCT TCGTGCGCTA CCTGTGGGAC AAGCCCTCCA GCCACCAGAG CGTGGCCAAG
CTCGGCTATG TGGAGCCGAT TCCCCAATGG GGCTGGATGG TCGGCACCGG CCTGTACCTG
GACGATGTCG AGCAGACCCT GCGCGAGATC GACCGGCGCG CGCAGGCCAA TATCGATCAG
ACCCTGGCGT GGGTCGTCGC CATCGCCGCG GTGTGCATCC TGCTGGTGGC CGGCAGCGGG
CTGGCGCTCA ACGTGAGCGA CCACCGCGAG GCCGATGCCA AGCTGCGCCA GCTGGCGCAG
CAGGTGGTGC ACTCGCAGGA GGACGAGCGC GCGCGCGTGT CGCGCGAGCT GCACGACGGC
ATCAGCCAGG TGCTGGTCTC GACCAAGCTG CTGCTCGAAA CCGCGCACGG CCACCTGGAG
CCGCCGCCCG GCCACGCGAC GCCACCGGGC GCGCCCGCGA CCGACAAGGC CGCCGGCATG
CTGCGCCGGG CGCTGGACCG CCTCAACGGG GCGCTGGGCG AGGTGCGGCG CGTATCGCAC
AACCTGCGCC CCGCGCTGCT GGACGATCTC GGCCTGGCCG CCGCGCTGGA GCTGCTGGTG
CGCGAGACCC GCGAAGCCCA CGAAGACCGC CAGCCCGGCT TCGCCATCAC CCTGGAGACC
GCCGGCCCGC CGGTGCAGTT GCCGGACGCG TGCAACACGG CCTTCTTCCG CATCGCGCAG
GAGGCGGTCT CCAACATCGA GCGCCACGCC ACGGGCGCCA CGCGCATCGG CCTGCTGCTC
GAGAACGATC TCGATGCGGT GCGCCTGTCG ATCCGCGACA ACGGCCCGGG CTTCGACGTG
GAATCGGTCC AGGTCGACCC CGAGCACGGC ATCGGCCTGC GCAACATGCG CGAGCGCATG
GCCGCCCTGG GCGGCACCTG TACCATCGTC TCCGGCCCGC ACGGCACCGA AGTCGGCGTG
GCGTTGCCGC ATCTCGTGAT CGCCCGGCTG GCCTCGGCCG CCGCGTCCTC ATCCGCTTCC
GTTTCCGCTT CCCCGTCCGC ATGA
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| Protein sequence | MKLRQKILLL AVAPLTIAML AIMLTVRHQS IALAQHERQL VESAYLQAKE AELRAHVKLA
RSAIAPLLAS GRSDQATRDE AMRTLARLDF GPDGYFFLYD LRGRNLMHPR QPELVGRDLW
RLTDARGQPT IQRLVAAAQA GGGFVRYLWD KPSSHQSVAK LGYVEPIPQW GWMVGTGLYL
DDVEQTLREI DRRAQANIDQ TLAWVVAIAA VCILLVAGSG LALNVSDHRE ADAKLRQLAQ
QVVHSQEDER ARVSRELHDG ISQVLVSTKL LLETAHGHLE PPPGHATPPG APATDKAAGM
LRRALDRLNG ALGEVRRVSH NLRPALLDDL GLAAALELLV RETREAHEDR QPGFAITLET
AGPPVQLPDA CNTAFFRIAQ EAVSNIERHA TGATRIGLLL ENDLDAVRLS IRDNGPGFDV
ESVQVDPEHG IGLRNMRERM AALGGTCTIV SGPHGTEVGV ALPHLVIARL ASAAASSSAS
VSASPSA
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