| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0017 |
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| Symbol | pckA |
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| ID | 1218819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 18932 |
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| End bp | 20800 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637236373 |
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| Product | phosphoenolpyruvate carboxykinase |
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| Protein accession | NP_518138 |
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| Protein GI | 17544736 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.982063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC CCGTGATGCA GGGTGTTCCC GCATTGAACG TGCCCGCCTA TGTGAAACAC
GCGCGGCTGG TGGCGTGGGT CAGCGAGATC GCTGCGCTCA CCAAGCCGGA GCGCGTGGTC
TGGTGCGATG GCTCGCAGGA GGAATACGAC CGCCTGTGCG CCGAGATGGT CGCCGCCGGC
ACGCTCAAGC AGCTCAATCC CGCCAAGCGC AAGAACTCGT ACCTGGCGCT GTCCGACCCC
TCGGACGTGG CGCGTGTGGA GGATCGGACC TTCATCTGCT CGCAGAAGCA GGAAGACGCG
GGCCCGACCA ACAACTGGAC CGCCCCGGCC GAGATGCGCC AGACGCTGAA CGGCCTGTTC
GACGGTTGCA TGCGCGGTCG CACGCTGTAC GTGGTGCCGT TCTCGATGGG CCCGCTGGGC
TCGCCGATCG CGCACATCGG CGTGGAGCTG TCCGACAGCC CGTATGTGGC CGTCAACATG
CGCATCATGA CCCGCATGGG CCGTGCCGTG TACGACGTGC TGGGCGCCGA CGGCGAGTTC
GTGCCGTGCG TGCATACCGT CGGTAAGCCG CTGGCCGCGG GTGAACAGGA TGTGCCGTGG
CCGTGCAACC CGACCAAGTA CATCGTGCAC TTCCCGGAAA CGCGCGAGAT CTGGTCGTTC
GGCTCGGGCT ACGGCGGCAA CGCGCTGCTG GGCAAGAAGT GCTTCGCGCT GCGGATCGCT
TCCACCATGG GCCGCGACCA GGGCTGGCTG GCCGAGCACA TGCTGATCCT GGGCGTGACC
TCGCCCGAGG GCAAGACCTA CCACGTGGCC GCGGCCTTCC CGTCGGCCTG CGGCAAGACC
AACTTCGCGA TGCTGATTCC GCCGGCCGGC TTCGACGGCT GGAAGGTCAC CACCATCGGC
GACGACATCG CCTGGATCAA GCCGCGCCAG GACGCCAACG GTCAGACGCG CCTGTACGCC
ATCAACCCGG AAGCCGGTTT CTTCGGTGTG GCGCCGGGCA CGGGCGAGAA GACCAACTTC
AACGCGATGG CCACGCTCAA GGAAAACGTC ATCTTCACCA ACGTCGCGCT TACCGATGAC
GGCGACGTGT GGTGGGAAGG CATGACCGAC ACGCCGCCCG CGCACCTGAC CGACTGGCAA
GGCCAGGACT GGACCCCGGC GATCGCCAAG GAAACCGGCC GCAAGGCCGC GCACCCGAAC
TCGCGCTTCA CGGCGCCGGC TGCGCAGTGC CCGTCGATCG ATCCGGAGTG GGACAACCCG
GCCGGCGTGG CCATCGATGC GTTCATCTTC GGCGGCCGCC GCTCGACCAC CGTGCCGCTG
GTGACCGAAG CGCGCGACTG GACCGAAGGC GTGTACATGG CCGCCACGAT GGGCTCGGAA
ACCACCGCCG CCGCCGTCGG CCAGCAGGGC GTGGTGCGCC GCGATCCGTT CGCCATGCTG
CCGTTCTGCG GCTACAACAT GGCCGACTAT TTCGCGCACT GGCTCAAGCT GGGCGACCAG
CTGGCCAAGA GCGGCGCCGA GCTGCCGAAG ATCTTCTGCG TCAACTGGTT CCGCAAGGAT
GAGCAGGGCC GCTTCGTGTG GCCGGGCTTC GGCGAGAACA TGCGCGTGCT GAAGTGGATG
ATCGACCGGA TCGAAGGCCA GGCTCGCGGC GACGAGCATG TCTTTGGCGT GTCGCCGCGC
TACGAGGAGC TGCGCTGGGA TGGGCTGGAC TTCTCCGCCG AGCAGTTCGC CAAGGTGATC
TCGCTGGATG CGCAGGCCTG GCAGCAGGAA CTGACGCTGC ACGCCGAGCT GTTCGCCCAG
CTGGCGCATC ACCTGCCGCA GGCGCTGCCG GAAGCCAAGG CACGTCTGGA GGCCCGCCTG
CAGGGCTGA
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| Protein sequence | MNQPVMQGVP ALNVPAYVKH ARLVAWVSEI AALTKPERVV WCDGSQEEYD RLCAEMVAAG
TLKQLNPAKR KNSYLALSDP SDVARVEDRT FICSQKQEDA GPTNNWTAPA EMRQTLNGLF
DGCMRGRTLY VVPFSMGPLG SPIAHIGVEL SDSPYVAVNM RIMTRMGRAV YDVLGADGEF
VPCVHTVGKP LAAGEQDVPW PCNPTKYIVH FPETREIWSF GSGYGGNALL GKKCFALRIA
STMGRDQGWL AEHMLILGVT SPEGKTYHVA AAFPSACGKT NFAMLIPPAG FDGWKVTTIG
DDIAWIKPRQ DANGQTRLYA INPEAGFFGV APGTGEKTNF NAMATLKENV IFTNVALTDD
GDVWWEGMTD TPPAHLTDWQ GQDWTPAIAK ETGRKAAHPN SRFTAPAAQC PSIDPEWDNP
AGVAIDAFIF GGRRSTTVPL VTEARDWTEG VYMAATMGSE TTAAAVGQQG VVRRDPFAML
PFCGYNMADY FAHWLKLGDQ LAKSGAELPK IFCVNWFRKD EQGRFVWPGF GENMRVLKWM
IDRIEGQARG DEHVFGVSPR YEELRWDGLD FSAEQFAKVI SLDAQAWQQE LTLHAELFAQ
LAHHLPQALP EAKARLEARL QG
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