| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0012 |
|---|
| Symbol | acrR |
|---|
| ID | 1218814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 13346 |
|---|
| End bp | 14005 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637236368 |
|---|
| Product | putative AcrAB operon repressor transcription regulator protein |
|---|
| Protein accession | NP_518133 |
|---|
| Protein GI | 17544731 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.631075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0464367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGAC GAACCAAGGA AGAAGCGCTG GAAACGCGCA ACCGCATCCT CGACGCGGCG
GAAGAGGTGT TCTATGTGCG TGGCGTGGCG CGCACGTCGC TATCCGACAT CGCGCAGGCG
GCCGGTGTCA CGCGCGGCGC CATCTACTGG CATTTCCGCA ACAAGGCCGA TGTGTTCGCC
GCCATGTGCG AGCGCGTCAA GCTGCCGATG GAGACCCTGT GCTCGCCGCT GGGCGTCGAA
CCCAACGATC CGCTGGGCGA GCTGCGCAAT GTGGCCAATT TCGTGCTGCA GCAGCTGGTG
GAAGACATGC ACTGGCGCCG GGTCTTCGAG ATCATGTTCA ACAAGTGCGA GTTCGTGGAG
GACACGAGCC CGATCCTCAA GCGCCAGCAG GAGTCCTTCG AGGAGGGGCT TGCACGCCTG
ACCCACATCA TCGGGCAGGC GGCCCGGCGC GGGCAGCTGC CGCCCGACCT GGATGTGCCG
CTGGCGGTGG CGCATTTCCA CGCCTCGTTC GGCGGCATCA TGGGCGACTA CCTGTTCTAT
CCGGACGCCT CCAGCCTCGC CGTCAAGCGC GAGCGCTTCG TCGATGCCTG CATCGACACA
CTCAAGTACT CGCCCGCGCT GCGCCTGGCG CAGCCCGTCG TCGCCGAGGC TTGTGCATGA
|
|---|
| Protein sequence | MVRRTKEEAL ETRNRILDAA EEVFYVRGVA RTSLSDIAQA AGVTRGAIYW HFRNKADVFA
AMCERVKLPM ETLCSPLGVE PNDPLGELRN VANFVLQQLV EDMHWRRVFE IMFNKCEFVE
DTSPILKRQQ ESFEEGLARL THIIGQAARR GQLPPDLDVP LAVAHFHASF GGIMGDYLFY
PDASSLAVKR ERFVDACIDT LKYSPALRLA QPVVAEACA
|
|---|
| |