Gene RSc0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0007 
Symbol 
ID1218809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp5188 
End bp5721 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content67% 
IMG OID637236363 
Producthypothetical protein 
Protein accessionNP_518128 
Protein GI17544726 
COG category[R] General function prediction only 
COG ID[COG1408] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.145458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGG GCAATGACTA CACCTGGTGG CGCAAAGCTG GCGAAGCCGC CGAAGCGCTT 
TTCTACGCCA ACGGCTGGGC TGCTCGCGCC GCCTATGCAT TGGGTTTGCA AGGCCGCCTG
CGGGTCGATC GCCGCGATGT GTATTTGCCG CTGAAGCCGC TCGCCGAGCT GCTCAGGGTT
GCGTTCGCCT CGGACTTCCA CGCGGGGCCG CTCACCGATC CTCGTCTGCT CGATGCGGTC
GTGCGGAGGA TCGATGCGTT CGCGCCGCAC ATCTTGCTGC TGGGTGGAGA TTTCGTTTCG
CTGCATCACC GGCATGTCTC GTCGCTGGCG GTCCGGCTCG GCGAACTGCG TGTCCCGGCC
GGCATGTTCG GTGTCTACGG CAAACGCGGC AAGCCGGAGT GGGCTGTGTG GCGTGGCCGC
GCGTTCAAGG CGCGCGAGCA TTGTCGGTAC GCAGACCGGC ATGCCGCTCG GCTTCCCGAT
TACGCCGTGC CGCCCGCACC TCGCCGCTGT ATTCGACGGC GAACAGCGCG ATGA
 
Protein sequence
MGRGNDYTWW RKAGEAAEAL FYANGWAARA AYALGLQGRL RVDRRDVYLP LKPLAELLRV 
AFASDFHAGP LTDPRLLDAV VRRIDAFAPH ILLLGGDFVS LHHRHVSSLA VRLGELRVPA
GMFGVYGKRG KPEWAVWRGR AFKAREHCRY ADRHAARLPD YAVPPAPRRC IRRRTAR