Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0007 |
Symbol | |
ID | 1218809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 5188 |
End bp | 5721 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236363 |
Product | hypothetical protein |
Protein accession | NP_518128 |
Protein GI | 17544726 |
COG category | [R] General function prediction only |
COG ID | [COG1408] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.145458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGGG GCAATGACTA CACCTGGTGG CGCAAAGCTG GCGAAGCCGC CGAAGCGCTT TTCTACGCCA ACGGCTGGGC TGCTCGCGCC GCCTATGCAT TGGGTTTGCA AGGCCGCCTG CGGGTCGATC GCCGCGATGT GTATTTGCCG CTGAAGCCGC TCGCCGAGCT GCTCAGGGTT GCGTTCGCCT CGGACTTCCA CGCGGGGCCG CTCACCGATC CTCGTCTGCT CGATGCGGTC GTGCGGAGGA TCGATGCGTT CGCGCCGCAC ATCTTGCTGC TGGGTGGAGA TTTCGTTTCG CTGCATCACC GGCATGTCTC GTCGCTGGCG GTCCGGCTCG GCGAACTGCG TGTCCCGGCC GGCATGTTCG GTGTCTACGG CAAACGCGGC AAGCCGGAGT GGGCTGTGTG GCGTGGCCGC GCGTTCAAGG CGCGCGAGCA TTGTCGGTAC GCAGACCGGC ATGCCGCTCG GCTTCCCGAT TACGCCGTGC CGCCCGCACC TCGCCGCTGT ATTCGACGGC GAACAGCGCG ATGA
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Protein sequence | MGRGNDYTWW RKAGEAAEAL FYANGWAARA AYALGLQGRL RVDRRDVYLP LKPLAELLRV AFASDFHAGP LTDPRLLDAV VRRIDAFAPH ILLLGGDFVS LHHRHVSSLA VRLGELRVPA GMFGVYGKRG KPEWAVWRGR AFKAREHCRY ADRHAARLPD YAVPPAPRRC IRRRTAR
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