Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0006 |
Symbol | |
ID | 1218808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 4757 |
End bp | 5080 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637236362 |
Product | hypothetical protein |
Protein accession | NP_518127 |
Protein GI | 17544725 |
COG category | [R] General function prediction only |
COG ID | [COG4551] Predicted protein tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0720243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.140515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAC TGTTCATCTG CAGCCGCAAC CGGCTGCGCA GTCCCACCGC GGAATCCATA TTCGCGCACT GGCCGAATGT CGACACCGAT TCGGCAGGCC TGGCGCCCGA TGCCGACGTC CCACTGACGG CCGATCAGCT CGAGTGGGCA GAGGTCATTT TCGTCATGGA GCGCTCCCAC CGCCGGCGCC TGTCTCAGCG GTTTGGTCCG TGGCTGCGTG GCAAGCGGGT CGTCTGCCTG GATATCCCCG ACGACTACCT GTTCATGCAG CCCGAGCTGG TCGCGTTGCT GGAGCGACGT GCGGGCCCGT ATCTGCGGTC GTGA
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Protein sequence | MRALFICSRN RLRSPTAESI FAHWPNVDTD SAGLAPDADV PLTADQLEWA EVIFVMERSH RRRLSQRFGP WLRGKRVVCL DIPDDYLFMQ PELVALLERR AGPYLRS
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