Gene RSc0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0006 
Symbol 
ID1218808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp4757 
End bp5080 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID637236362 
Producthypothetical protein 
Protein accessionNP_518127 
Protein GI17544725 
COG category[R] General function prediction only 
COG ID[COG4551] Predicted protein tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0720243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.140515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAC TGTTCATCTG CAGCCGCAAC CGGCTGCGCA GTCCCACCGC GGAATCCATA 
TTCGCGCACT GGCCGAATGT CGACACCGAT TCGGCAGGCC TGGCGCCCGA TGCCGACGTC
CCACTGACGG CCGATCAGCT CGAGTGGGCA GAGGTCATTT TCGTCATGGA GCGCTCCCAC
CGCCGGCGCC TGTCTCAGCG GTTTGGTCCG TGGCTGCGTG GCAAGCGGGT CGTCTGCCTG
GATATCCCCG ACGACTACCT GTTCATGCAG CCCGAGCTGG TCGCGTTGCT GGAGCGACGT
GCGGGCCCGT ATCTGCGGTC GTGA
 
Protein sequence
MRALFICSRN RLRSPTAESI FAHWPNVDTD SAGLAPDADV PLTADQLEWA EVIFVMERSH 
RRRLSQRFGP WLRGKRVVCL DIPDDYLFMQ PELVALLERR AGPYLRS