Gene WD1282 details

Gene Information

• Locus tag: WD1282
• Symbol: rimM
• ID: 2738307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: -
• Start bp: 1225329
• End bp: 1225835
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637173433
• Product: 16S rRNA-processing protein RimM
• Protein accession: NP_966992
• Protein GI: 42521077
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACA ATCTGGTATG CTTAGGAATT ATTACCTCTC CTCACGGAAT TAAAGGAGCT 
GTTAAAGTAA AAACCTTTAC TGAAAAGCCT GAAAATATCT CCTTATATGG TAAGCTAATA 
AGTGGTGATG AGAATTATAA AATAGACTCA GTATCCGTCA TAGGTGATAA TTTAGTAATA 
GCTACAATAA GCGGAGTAAA TTCCCGTAAT GAAGCAGAGC TTTTAAGGAA TAAGAAGCTA 
TATATAGAAA GAAGCAAGTT ACCAGAGCTA AATGATGAGG ATGAATTTTA CCAAAGTGAC 
CTTGTAGATA TGGAAGTAAG GCTGAAAAGT AATGAATTAT ATGGCTATGT AAAATCTGTG 
TATAATTTCG GCTCAGGGGA TATATTAGAA ATTTTAGTTA TCAGCACAAA AAAACGTATT 
ATGCTGTCTT TCACTAAAGA GATATTTCCA CATATAAATA TAAAGGGGAG GTATATAGTA 
TTAAATATAC CAGAATTTAT TGACTAA 

 

Protein sequence

MNDNLVCLGI ITSPHGIKGA VKVKTFTEKP ENISLYGKLI SGDENYKIDS VSVIGDNLVI 
ATISGVNSRN EAELLRNKKL YIERSKLPEL NDEDEFYQSD LVDMEVRLKS NELYGYVKSV 
YNFGSGDILE ILVISTKKRI MLSFTKEIFP HINIKGRYIV LNIPEFID