Gene WD1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1259 
SymbolmnmA 
ID2737950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand+ 
Start bp1204656 
End bp1205768 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content39% 
IMG OID637173410 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionNP_966970 
Protein GI42521055 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.777446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAG AATTTGAAAT AGAACCTCTG CTAAAAGATA AAGCTCCGCA CCAGACCAAG 
GCTGTTGTTG CAATGTCCGG GGGAGTTGAT AGCTCCGTTG CTGCAGCACT GCTACATAAC 
CTTGGGTACA AAGTGGTAGG TGTGACTCTT CAACTCTATG GCACCGACGG TAATGCTAAC 
GCAAGAAAGG GCGCATGCTG CGCTGGACAG GATATTTATG ACGCTAAGCG TGTAGCTGAA 
AGTGTTGGCT TTCCTCACTA TCTTTTAAAC TATGAGGAAA TATTCAAAAA GGAAGTAATA 
GAGGATTTTG CGAGTACCTA TATGCGTGGG GAAACTCCCA TACCATGCGT GAGATGTAAC 
CAAACGGTAA AATTTCGTGA TCTATTGCAA GTTACAAAAA ATCTTGGTGC GGATGTGCTC 
GTAACAGGAC ATTACGTGAG AAGGTTAGAA AAAAATGGTG AGGTAAAGTT GTGCAGAAGC 
ATTGATAAAA GTAAAGATCA AAGTTATTTT TTGTTTGCTA CAACTCAAGA GCAATTGAAG 
CTTTTGCGAT TTCCACTAGG TGGGTTCTAT AAAAGTGATA TAAGAAAATT AGCAAAGTAT 
TTCAGCTTAC AAATTTCTGA AAAGCAGGAC AGTCAAGATA TATGCTTTGT TTCCGAAAGC 
TATAGTAAAA CAATAGCTAA ATTAGCTCCA CAATCTGTAC AGAAAGGTAA AATAGTGGAT 
GTTAATGGAA AAGTGCTAGG CGAGCACAGT GGCATAGTAA ATTTTACAGT GGGGCAAAGA 
AAGGGCTTGG GTATCGCACA CAATGAACCT CTTTATGTGA TAAAAATTAA TACAGAAAAT 
AATGAGGTTA TAGTAGGTCC GATCAACGTA TTAATGCAAA AAAAAATATT GATCAAGGAG 
TTAAATTGGT TAGAACAACC AAAGGAAGGT ATGGAAGTAA CTGTGAAGCT GAGATCATCA 
CATGTGGGAA GTTTAGCAAC AATACATTCA ACTGACGAAA AAAATAAAGC CTGTGTCATT 
TTAAACGACG ATTACTTTGG CATCAGTCCA GGTCAAGCCT GTGTAGCGTA TAAAGATGAG 
CAAGTTATCG GCGGTGGATG GATATGCTCT TAA
 
Protein sequence
MLKEFEIEPL LKDKAPHQTK AVVAMSGGVD SSVAAALLHN LGYKVVGVTL QLYGTDGNAN 
ARKGACCAGQ DIYDAKRVAE SVGFPHYLLN YEEIFKKEVI EDFASTYMRG ETPIPCVRCN 
QTVKFRDLLQ VTKNLGADVL VTGHYVRRLE KNGEVKLCRS IDKSKDQSYF LFATTQEQLK 
LLRFPLGGFY KSDIRKLAKY FSLQISEKQD SQDICFVSES YSKTIAKLAP QSVQKGKIVD 
VNGKVLGEHS GIVNFTVGQR KGLGIAHNEP LYVIKINTEN NEVIVGPINV LMQKKILIKE 
LNWLEQPKEG MEVTVKLRSS HVGSLATIHS TDEKNKACVI LNDDYFGISP GQACVAYKDE 
QVIGGGWICS