Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD1208 |
Symbol | dapF |
ID | 2738646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 1155334 |
End bp | 1156125 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637173356 |
Product | diaminopimelate epimerase |
Protein accession | NP_966920 |
Protein GI | 42521005 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTG GCCAAAATTC TGAAAATTTT ATCAAAATGC ACGGCACTGG TAACAATTTC GTTATCATAG ACTCACGTTC AACAAACAAT TTAGACTGGA ACCATAGACA AATTGCTGAT CAAAGCAGTT GTGATCAAGT GATAATTATA ACAATGTCTA ATGCTGCAGA CTGTTTTATG CATATCTATA ATGCTGATGG CAGTCGAGCT GAAATGTGCG GAAACGCAGC ACGCTGTGTT GGATATTTGA TAATGTCAGA AAAAGGTGCT GAATACTCCA TTATTGAGCT AACAAGCAAA CGCATTTTAG AGTGTTTTAA AGTGGGTGAT AAATCCATAA AGGTTAACAT GGGTAAACCT TTGCTAAAAT GGCATGAAAT TCCCTTATCT ACTGAGTGTG ACACTCTTCA CTTACCTATA GAGCTTGAAA TGCTAAAAGA TCCTGTTGCA GTAAATATTG GCAATCCTCA CATAGTTTTT TTTGTTGATA ACATAAGTGA AATACCATTG CGAAATTTAG GACCAAAGCT AGAAAATCAC GCATTATTTC CTCGGAAAAT TAATGTTAGT ATTGCACAAG TTGAAAAGTC TGGAGAAATA GCTTTAAGAG TTTGGGAAAG AGGTACAGGC ATTACTGCAT CATGCGGTAG TGCAGCATGT GCAGCACTTG TTGCATCCAC ACTACGTGGA TCTCTGGTTG CCCAACAGAC TTCAGTAAAT TTACCAGGAG GCAAGTTATT AATCGAATGG GCAAATAACG TATTCATGAC CGGTGATATA GGGTTTTTGT GA
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Protein sequence | MMSGQNSENF IKMHGTGNNF VIIDSRSTNN LDWNHRQIAD QSSCDQVIII TMSNAADCFM HIYNADGSRA EMCGNAARCV GYLIMSEKGA EYSIIELTSK RILECFKVGD KSIKVNMGKP LLKWHEIPLS TECDTLHLPI ELEMLKDPVA VNIGNPHIVF FVDNISEIPL RNLGPKLENH ALFPRKINVS IAQVEKSGEI ALRVWERGTG ITASCGSAAC AALVASTLRG SLVAQQTSVN LPGGKLLIEW ANNVFMTGDI GFL
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