| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1162 |
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| Symbol | |
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| ID | 2738094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | + |
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| Start bp | 1111473 |
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| End bp | 1112303 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637173313 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | NP_966878 |
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| Protein GI | 42520963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0658766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATACAAA ATGAGCAGGT GAAATTACTT GGCACACCGA TAATTAATAA TGACTACATA
GTAAAACCAG ATGAAGAGTA TGTGGTGCAT CTCGTTCAAC CTGACATATC CACATCAATT
GAGCCTAATT ATGACATAAA ACTTAATATC GTCTATGAAG ATGAGGACAT TATAGTTCTG
AGTAAACAAA GTGGATTAAC AGTGCACCCA GGTGCTGGGA CAAACAATGA TACGCTTTTG
AACGCAGTTA TCGCTCACCT TAATGTAAGA CCAGGAATTG TTCATAGACT CGATAAAGAT
ACTAGTGGGC TAATGGTAAT TGCAAAAAAT GAAGCAGCCC ATAGTTTTTT GTCTGAATTG
TTATCGAATC GCAAAATAAA GCGGGAATAC TTAGCAGTAG TTTGGGGAAC ATTATCTTCT
CAGCAAGGCA CGATAAAAAC TAACATTGCT CCCAAACGCG GTAATAAAGA AATGATGTGT
GTAACAAAAA TCACAGGCAA ATTAGCAATC ACTCACTATT TAGTGCAAAA AGTTATAGGA
CAAGTAAGCC TCGTTAAATG CACTTTAGAG ACAGGCAGAA CACACCAAAT TCGAGTCCAC
ATGAGCCACA TAGGACATTC CATAGTTGGT GATCAAGTTT ATGGAAAAAA TAGTAGTAAA
AGCACAAAAT ATGCTAAAAA CTCTAGTTTC ATTCGTAATT TCAATAGACA AGCACTACAT
GCTTATACAC TGGGCTTATA CCACCCAAAA AGTAAGGAAT ACATGGAATT TGTCTCTGAT
TTACCGCAAG ATATAAAAAC TTTAATTGGT GAGTTTGACA ACATATCTTA A
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| Protein sequence | MIQNEQVKLL GTPIINNDYI VKPDEEYVVH LVQPDISTSI EPNYDIKLNI VYEDEDIIVL
SKQSGLTVHP GAGTNNDTLL NAVIAHLNVR PGIVHRLDKD TSGLMVIAKN EAAHSFLSEL
LSNRKIKREY LAVVWGTLSS QQGTIKTNIA PKRGNKEMMC VTKITGKLAI THYLVQKVIG
QVSLVKCTLE TGRTHQIRVH MSHIGHSIVG DQVYGKNSSK STKYAKNSSF IRNFNRQALH
AYTLGLYHPK SKEYMEFVSD LPQDIKTLIG EFDNIS
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